Author

J. F. Munoz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 6

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 6 Organism:C. elegans· 3 Assay:whole-genome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:drug response / drug discovery· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2

Frequent Co-Authors

C. A. Cuomo· 5 shared E. Ballou· 2 shared J. M. Rybak· 2 shared K. S. Barker· 2 shared K. Voelz· 2 shared P. D. Rogers· 2 shared S. L. Kelly· 2 shared A. Abdullah· 1 shared

Activity by Year

2018-2021 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

5 shared papersMicrobiology

C. A. Cuomo

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

In vivo emergence of high-level resistance during treatment reveals the first identified mechanism of amphotericin B resistance in Candida auris

J. M. Rybak, K. S. Barker, J. F. Munoz, J. E. Parker, S. Ahmad, E. Mokaddas, A. Abdullah, R. S. Elhagracy, S. L. Kelly, C. A. Cuomo, P. D. Rogers

The paper identifies a mutation in the ERG6 gene as the first mechanism of amphotericin B resistance in Candida auris, observed during in vivo treatment.

bioRxiv · Oct 8, 2021Microbiology

Chromosome-level genome assembly of a human fungal pathogen reveals synteny among geographically distinct species

M. Voorhies, S. Cohen, T. P. Shea, S. Petrus, J. F. Munoz, S. Poplawski, W. E. Goldman, T. P. Michael, C. A. Cuomo, A. Sil, S. Beyhan

This study presents chromosome-level genome assemblies of five Histoplasma strains, revealing synteny and gene expression patterns across geographically distinct isolates.

bioRxiv · Jul 13, 2021Microbiology

Bacterial endosymbionts influence fungal transcriptional profiles with implications for host response in the human fungal pathogens Rhizopus microsporus and Rhizopus delemar

P. Sephton-Clark, J. F. Munoz, H. Itabangi, K. Voelz, C. Cuomo, E. Ballou

This study examines how bacterial endosymbionts affect the transcriptional profiles of two fungal species, Rhizopus delemar and Rhizopus microsporus, and their interactions with innate immune cells.

bioRxiv · Dec 2, 2020 · PreprintMicrobiology

Genome-wide analysis of experimentally evolved Candida auris reveals multiple novel mechanisms of multidrug-resistance

H. Carolus, S. Pierson, J. F. Munoz, A. Subotic, R. B. Cruz, C. A. Cuomo, P. Van Dijck

This study uses in vitro experimental evolution to identify novel multidrug-resistance mechanisms in Candida auris, revealing mutations in resistance genes and new pathways contributing to drug resistance.

bioRxiv · Sep 28, 2020Microbiology

Mutations in TAC1B: a novel genetic determinant of clinical fluconazole resistance in C. auris

J. M. Rybak, J. F. Munoz, K. S. Barker, J. Parker, B. D. Esquivel, E. L. Berkow, S. R. Lockhart, L. Gade, G. E. Palmer, T. C. White, S. L. Kelly, C. A. Cuomo, P. D. Rogers

This paper identifies mutations in TAC1B as a novel genetic determinant of clinical fluconazole resistance in C. auris, showing their contribution to resistance through increased CDR1 expression and functional validation.

bioRxiv · Feb 18, 2020Microbiology

Pathways of pathogenicity: The transcriptional stages of germination in the fatal fungal pathogen Rhizopus delemar

P. C. S. Sephton-Clark, J. F. Munoz, E. Ballou, C. A. Cuomo, K. Voelz

This study identifies the transcriptional stages of germination in Rhizopus delemar, revealing key molecular processes involved in spore-to-hyphae transition and disease progression.

bioRxiv · May 25, 2018Microbiology