Author

M. Nishimura

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Bioengineering· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Approach:experimental assay· 4 Research Focus:cell type annotation· 2 Approach:deep learning· 2 Research Focus:host-pathogen & immune response· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

K. Kuriyama· 2 shared M. Fujimuro· 2 shared T. Izumi· 2 shared T. Watanabe· 2 shared A. J. Nelson· 1 shared A. Kerr· 1 shared A. McGraw· 1 shared A. MIyabe· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersMicrobiology

K. Kuriyama

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Spherical Echo-Planar Time-resolved Imaging (sEPTI) for rapid 3D quantitative T2* and Susceptibility imaging

N. Wang, C. Liao, X. Cao, M. Nishimura, Y. Brackenier, M. Yurt, M. Gao, D. Abraham, C. Alkan, S. S. Iyer, Z. Zhou, A. Kerr, J. Haldar, K. Setsompop

This paper introduces sEPTI, a 3D imaging technique for rapid whole-brain T2* and susceptibility mapping, achieving faster imaging and improved quality compared to existing methods.

bioRxiv · Feb 21, 2024Bioengineering

Conserved cysteine residues in Kaposi's sarcoma herpesvirus ORF34 are necessary for viral production and viral pre-initiation complex formation.

T. Watanabe, A. McGraw, K. Narayan, H. Tibebe, K. Kuriyama, M. Nishimura, T. Izumi, M. Fujimuro, S. Ohno

This study identifies four conserved cysteine residues in KSHV ORF34 essential for vPIC formation and viral production through alanine-scanning mutants and structural modeling.

bioRxiv · Mar 8, 2023Microbiology

Novel monoclonal antibodies showing broad neutralizing activity for SARS-CoV-2 variants including Omicrons BA.5 and BA.2.75

H. Ishimaru, M. Nishimura, L. H. Tjan, S. Sutandhio, M. I. Marini, G. B. Effendi, H. Shigematsu, K. Kato, N. Hasegawa, K. Aoki, Y. Kurahashi, K. Furukawa, M. Shinohara, T. Nakamura, J. Arii, , Y. Mori

bioRxiv · Sep 2, 2022 · PreprintMicrobiology

Extension of bacterial rDNA sequencing to concurrent epigenetic analysis and its application to 16S meta-epigenetics

M. Nishimura, T. Tanaka, S. Murata, A. MIyabe, T. Ishige, K. Kawasaki, M. Yokoyama, S. Tojo-Nishimura, K. Matsushita

This paper introduces an add-on method to 16S rDNA sequencing for concurrent DNA methylation analysis, identifying novel methylation sites and a methyltransferase in Morganella morganii.

bioRxiv · Feb 15, 2022 · PreprintMicrobiology

Kaposi’s sarcoma-associated herpesvirus ORF66 is essential for late gene expression and virus production via interaction with ORF34

T. Watanabe, M. Nishimura, T. Izumi, K. Kuriyama, Y. Iwaisako, K. Hosokawa, A. Takaori-Kondo, M. Fujimuro

This study identifies ORF66's critical role in KSHV late gene expression and viral production by interacting with ORF34 and binding to the K8.1 promoter.

Journal of Virology · Jan 6, 2020Peer-reviewedMicrobiology

CD36hi monocytes play immunoregulatory roles in human umbilical cord blood

J. G. Lee, K. E. Jager, Y. Seki, A. J. Nelson, A. Vuchkovska, M. Nishimura, P. White, K. L. Knight, M. Iwashima

This study identifies CD36hi monocytes in umbilical cord blood that generate Foxp3+ T cells with suppressive functions, distinct from adult regulatory T cells.

bioRxiv · Nov 15, 2018 · PreprintImmunology