Author

Felipe E. Ciamponi

Universidade Estadual de Campinas (UNICAMP)ORCID 0000-0002-0076-8824Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Katlin B. MassireriD· 3 shared Aiden M. Sababi· 1 shared Alexandre MaucueriD· 1 shared Bernhard KüsteriD· 1 shared C.H. ArrowsmithiD· 1 shared Costanza Ferrari BardileiD· 1 shared Dalia Baršytė-LovejoyiD· 1 shared David ShechteriD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersNeuroscience

Katlin B. MassirerORCID

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3 papers

Recent·Most cited

PRMT5 is required for full-length HTT expression by repressing multiple proximal intronic polyadenylation sites

Mona Alqazzaz, Felipe E. Ciamponi, Jolene Caifeng Ho, Maxim I. Maron, Manisha Yadav, Aiden M. Sababi, Graham Dickson and Hugh MacLeod, Moloud Ahmadi, Garrett Bullivant, Vincent Tano, Sarah R. Langley, María Sánchez‐Osuna, Patty Sachamitr, Michelle M. Kushida, Laura M. Richards, , Panagiotis Prinos

This paper identifies PRMT5 as a regulator of HTT mRNA splicing and alternative polyadenylation, showing that its inhibition reduces full-length HTT protein levels by promoting premature termination and cleavage.

bioRxiv · Mar 14, 2024 · PreprintNeuroscience

UHMK1 is a novel splicing regulatory kinase

Vanessa Cristina Arfelli, Yun-Chien Chang, Johannes Bagnoli, Paul Kerbs, Felipe E. Ciamponi, LAURA HELENA PAZ, Serhii Pankivskyi, Jean de Matha Salone, Alexandre Maucuer, Katlin B. Massirer, Wolfgang Enard, Bernhard Küster, Philipp A. Greif, Leticia Fröhlich Archangelo

This study identifies UHMK1 as a splicing regulatory kinase by showing its role in phosphorylation, alternative splicing, and cellular processes through integrated phosphoproteomics and RNA-seq analyses.

Journal of Biological Chemistry · Feb 17, 2023Peer-reviewedMolecular Biology

BioFeatureFinder: Flexible, unbiased analysis of biological characteristics associated with genomic regions

Felipe E. Ciamponi, Michael Lovci, Pedro Rodrigues Sousa da Cruz, Katlin B. Massirer

BioFeatureFinder identifies distinguishing genomic features by analyzing biological landmarks using a combination of statistical tests and machine learning, showing reliability in large-scale datasets.

bioRxiv · Mar 22, 2018 · PreprintBioinformatics