Author
Brotman Baty InstituteORCID 0000-0002-4587-5295Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Alexander Monell, Aishwarya A. Gogate, Dhruv Patravali, Kathleen Abadie, Gene Wei-Ming Yeo, Ananda W. Goldrath, Maximilian Heeg
SpatialTRACE extends anatomical annotations from a few structures to tissue-wide maps using graph and image-based models in spatial transcriptomics and microscopy.
bioRxiv · Sep 29, 2026 · PreprintBioinformatics
David Fraser Read, Gregory T. Booth, Riza M. Daza, Dana L. Jackson, Rula Green Gladden, Sanjay R Srivatsan, Brent Ewing, Jennifer M. Franks, Cailyn H. Spurrell, Anne Roshella Gomes, Diana R. O’Day, Aishwarya A. Gogate, Beth Martin, H. Hanh Larson, Christian Pfleger, , Cole Trapnell
The paper uses single-nucleus ATAC-Seq and RNA-Seq to analyze age and sex differences in human heart cells, identifying gene expression and chromatin changes linked to these factors.
Communications Biology · Aug 26, 2024Peer-reviewedGenomics
Kenneth L. Chiou, Xingfan Huang, Martin O. Bohlen, Sébastien Tremblay, Alex R. DeCasien, Diana R. O’Day, Cailyn H. Spurrell, Aishwarya A. Gogate, Trisha M. Zintel, Madeline G. Andrews, Melween I. Martínez, Lea M. Starita, Michael J. Montague, Michael L. Platt, Jay Shendure, Noah Snyder‐Mackler
The paper creates a single-cell multi-omic atlas of the rhesus macaque brain, identifying cell-type-specific regulatory elements and providing insights into brain evolution and disease.
Science Advances · Oct 12, 2023Peer-reviewedNeuroscience
Ammar Alghadeer, Sesha Hanson-Drury, Devon Duron Ehnes, Yan Ting Zhao, AP Patni, Diana R. O’Day, CH Spurrell, Aishwarya A. Gogate, Ashish Phal, H. Zhang, Arikketh Devi, Yuliang Wang, Lea M. Starita, Dan Doherty, Ian A. Glass, , Hannele Ruohola‐Baker
The paper establishes a single-cell atlas of human tooth development and uses it to guide the in vitro differentiation of ameloblasts from iPSCs, developing a mineralizing enamel organoid system.
bioRxiv · Aug 9, 2022 · PreprintDevelopmental Biology