Author
Ian A. Glass
University of WashingtonORCID 0000-0001-6762-8407Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2020-2026 · peak 13/yrCo-Author Collaboration Network
10 top collaborators · 20 mutual co-author linksMutual co-authors in cluster
48 papers
Recent·Most cited
- Genetic & Genomic MedicinemedRxivPreprint
A high-resolution human pangenome structural variant resource for improved disease association
Jiadong Lin, Jonas A. Gustafson, Julie Wertz…·Evan E. Eichler
The paper constructs a high-resolution human pangenome structural variant resource, identifies disease-associated SVs, and demonstrates its utility in filtering variants from probands and associating SVs with traits in a large cohort.
DOI 10.64898/2026.08.21.26361050 - Genetic & Genomic MedicineThe American Journal of Human GeneticsPeer-reviewed
Long-read transcriptome analysis using IsoRanker for identifying pathogenic variants in Mendelian conditions
Yong-Han Hank Cheng, Adriana Estela Sedeño-Cortés, Jane E. Ranchalis…·Andrew B. Stergachis
IsoRanker uses long-read transcriptomics to prioritize non-coding variants in Mendelian conditions by detecting expression outliers, allelic imbalance, and NMD, leading to the identification of pathogenic variants in one individual.
3 citationstop 2% - NeurosciencebioRxivPreprint
Prenatal cannabis exposure affects human fetal neurodevelopment: anintegrated multi-omics study
Guenther Kahlert, Xin Chen, Theo K. Bammler…·Jashvant D. Unadkat
This study investigates the molecular effects of prenatal cannabis exposure on human fetal brains, finding significant disruptions in male second trimester brains linked to neurodevelopmental disorders.
DOI 10.64898/2026.07.15.738779 - Cell BiologybioRxivPreprint
Phenotypic CRISPR screening identifies ZBTB10 as a novel regulator of human trophoblast differentiation
Meagan N. Esbin, Rituja Bhowmik, Hanqin Li…·Min Yang
The paper uses an arrayed CRISPR screen to identify ZBTB10 as a regulator of human trophoblast differentiation, showing its role in fusion and hormone secretion.
DOI 10.64898/2026.06.29.734890 - Genetic & Genomic MedicinemedRxivPreprint
Phenotype-Specific Recalibration of MAVE Data Enables Repurposing of BAP1 Functional Assays for Kury-Isidor Syndrome
Pankhuri Gupta, Elsa V. Balton, Malvika Tejura…·Andrew B. Stergachis
The paper recalibrates BAP1 MAVE data for different disease phenotypes to enable accurate variant classification across related disorders.
DOI 10.64898/2026.05.15.26352805 - Genetic & Genomic MedicinemedRxivPreprint
Genome-wide detection and clinical prioritization of tandem repeat outliers using long-read sequencing
Sophia B Gibson, Nikhita Damaraju, J. (Gus) Gustafson…·Danny E. Miller
The paper develops TRoLR, a pipeline using long-read sequencing to detect and prioritize pathogenic tandem repeat expansions in diverse populations, identifying known and novel expansions with clinical relevance.
DOI 10.64898/2026.04.30.26352103 - Cell BiologybioRxivPreprint
Membrane Tension Integrates Physical and Signaling Cues to Gate Cell Fate Transitions
Gibran Ali, Daniel F. Gibbard, Elisa Ghelfi…·Douglas Brownfield
This paper identifies cell membrane tension as a regulator of epithelial fate transitions in the lung, showing it integrates physical and signaling cues to control AT1 and AT2 cell differentiation.
- PathologyPLoS ONEPeer-reviewed
The Impact of Delayed Evacuation on the Quality of Human Fetal Tissue
Yasmeen Otaibi, Kevin Lee, Lucinda A. Cort…·Kimberly A. Aldinger
This study evaluates how delayed evacuation after fetal circulation cessation affects the quality of human fetal tissue, finding reduced cell viability and RNA quality but sufficient DNA for PCR.
DOI 10.1371/journal.pone.0328595 - NeurosciencebioRxivPreprint
Transcriptional Heterogeneity Reveals a Synaptic Gene Program in Developing and Adult Human Oligodendrocyte Precursor Cells
Aliya R. Grinberg, Li Liu, Irva Patel…·Hiroko Nobuta
The paper identifies a synaptic gene program in human oligodendrocyte precursor cells (OPCs) using single-cell RNA sequencing, revealing distinct embryonic and adult subsets with synaptic-related gene expression.
- Developmental BiologyGenes & DevelopmentPeer-reviewed
DIO3 coordinates photoreceptor development timing and fate stability in human retinal organoids
Christina McNerney, Clayton P. Santiago, Kiara C. Eldred…·Robert J. Johnston
This study identifies DIO3 as a regulator of photoreceptor development timing and fate stability in human retinal organoids, proposing an hourglass model for developmental progression.
5 citations - Cancer BiologyCancer DiscoveryPeer-reviewed
Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia
Ke Wang, Shayan Saniei, Nikita Poddar…·Eric Chi Wai So
This study shows that the developmental stage of hematopoietic stem cells influences leukemic transformation, lineage hierarchy, and therapy response in pediatric leukemia.
3 citations - Developmental BiologybioRxivPreprint
Lateral plate mesoderm directs human amnion and ventral skin organoid formation
Anh Phuong Le, Jin Kim, Qianyi Ma…·Karl R. Koehler
This study generates human ventral skin and amnion-like organoids by adjusting signaling and cellular composition, revealing key developmental pathways and interactions.
DOI 10.1101/2025.11.05.685987 - Systems BiologybioRxivPreprint
Multi-omic integration reveals dynamic changes in human placental metabolism across gestation
Mariana Parenti, Sam Rosen, Maya Pettes…·Stephen A. McCartney
The paper integrates metabolomic and transcriptomic data to identify dynamic changes in placental metabolism across trimesters in human pregnancy.
2 citations - Developmental BiologybioRxivPreprint
Clinical Interventions and Inflammatory Signaling Shape the Transcriptional and Cellular Architecture of the Early Postnatal Lung
Tristan Frum, Angeline Wu, Marcela S. Ymayo…·Jason R. Spence
The paper constructs a cellular atlas of the early postnatal human lung and identifies two distinct AT2 cell states linked to inflammatory signaling and clinical interventions.
- Genetic & Genomic MedicineeLifePeer-reviewed
Heterozygous variants in PLCG1 affect hearing, vision, cardiac, and immune function
Mengqi Ma, Yiming Zheng, Mingxi Deng…·Hugo Jozef Bellen
The paper reports seven individuals with PLCG1 variants causing hearing, vision, cardiac, and immune issues, and shows these variants have gain-of-function effects in Drosophila models.
2 citations - Genetic & Genomic MedicinemedRxivPreprint
Biallelic variants in the non-coding RNA gene RNU4-2 cause a recessive neurodevelopmental syndrome with distinct white matter changes
Rocío Rius, Alexander J. M. Blakes, Yuyang Chen…·Nicola Whiffin
The paper identifies biallelic variants in RNU4-2 causing a recessive neurodevelopmental syndrome with distinct white matter changes, expanding the known genotypic and phenotypic spectrum of RNU4-2-related disorders.
- NeuroscienceNeuronPeer-reviewed
Multimodal analyses reveal genes driving electrophysiological maturation of neurons in the primate prefrontal cortex
Yu Gao, Qiping Dong, Kalpana Hanthanan Arachchilage…·André M. M. Sousa
The paper identifies genes and regulatory networks driving electrophysiological maturation of neurons in primate prefrontal cortex, with implications for autism.
- NeurosciencePROTEOMICSPeer-reviewed
Multi-omics identification of extracellular components of the fetal monkey and human neocortex.
Felipe Vilicich, Dhanya Vettiatil, Seth Kattapong‐Graber…·Simone Sidoli
The paper identifies extracellular components in the developing fetal neocortex of humans and non-human primates using multi-omics approaches.
DOI 10.1002/pmic.202400385 - ImmunologyCell Reports MedicinePeer-reviewed
The Human Neural Cell Atlas of Zika Infection in developing human brain tissue: viralpathogenesis, innate immunity, and lineage reprogramming
Caleb Stokes, Leanne S. Whitmore, Dante Moreno…·Michael Gale
This study investigates ZIKV infection in fetal brain tissue, identifying astrocyte immune responses and neuronal dysfunction linked to congenital Zika syndrome.
- NeurosciencebioRxivPreprint
The mGluR5 Agonist, CHPG, Enhances Numbers of Differentiated Human Oligodendrocytes
Yangyang Huang, Celine Geywitz, Anjalika Bandaru…·Cheryl F. Dreyfus
This study shows that CHPG increases differentiation of human oligodendrocyte precursor cells and upregulates mGluR5 in MS astrocytes, suggesting potential therapeutic applications.
1 citation - Developmental BiologyNature CommunicationsPeer-reviewed
Chromosomal Instability in Human Trophoblast Stem Cells and Placentas
Danyang Wang, Andrew Cearlock, Katherine Lane…·Min Yang
This study reveals chromosomal instability as an inherent feature of trophoblast lineage, showing high prevalence of aneuploidy in human placentas and TSCs despite maintaining proliferative capacity.
- Developmental BiologyCell ReportsPeer-reviewed
Ciliary marginal zone of the developing human retina maintains retinal progenitor cells until late gestational stages
Kiara C. Eldred, Sierra J. Edgerton, Isabel Ortuño‐Lizarán…·Thomas A. Reh
The paper identifies a proliferative region in the fetal human retina that continues to generate neurons late in development, similar to the non-mammalian ciliary marginal zone.
4 citations - GeneticsNature GeneticsPeer-reviewed✦ In-depth digest
Synchronized long-read genome, methylome, epigenome, and transcriptome for resolving a Mendelian condition
Mitchell Robert Vollger, Jonas Korlach, Kiara C. Eldred…·Andrew B. Stergachis
Pooling Fiber-seq gDNA with concatenated MAS-Seq cDNA in one PacBio run gives phased genome, methylome, chromatin, and transcriptome, exposing four gene disruptions from one X;13 translocation.
48 citationstop 1% - Genetic & Genomic MedicinemedRxivPreprint
Interpreting variants associated with congenital heart disease with a regulatory map of the human fetal heart
X. Rosa Ma, Stephanie D. Conley, Maggie S. Chen…·J Engreitz
This study creates a gene regulation map of the human fetal heart to interpret genetic variants associated with congenital heart disease and cardiac traits, identifying valvular interstitial cells as key regulators.
- Developmental BiologybioRxivPreprint
A spatially-resolved blueprint of the developing human lung reveals a basal cell population regulated by a WNT-driven niche
Peggy P. Hsu, Ansley S. Conchola, Tristan Frum…·Jason R. Spence
The paper creates a spatially-resolved atlas of the developing human lung, identifying a WNT-driven niche that regulates basal cells.
- BioinformaticsNature Cardiovascular ResearchPeer-reviewed
APOE-NOTCH Axis Governs Elastogenesis During Human Cardiac Valve Remodeling
Ziyi Liu, Yu Liu, Zhiyun Yu…·Mingxia Gu
The paper identifies a novel APOE+ elastin-producing valve interstitial cell subtype and reveals the APOE-NOTCH signaling axis regulates elastogenesis during human cardiac valve remodeling.
- Molecular BiologyTranslational Vision Science & TechnologyPeer-reviewed
Lipid nanoparticle-mediated delivery of mRNA into the mouse and human retina and other ocular tissues.
C. Chambers, Gillian L. Soo, Abbi L. Engel…·Timothy J. Cherry
This paper demonstrates reliable mRNA delivery via lipid nanoparticles to specific retinal cells in mice and human ocular tissues without significant inflammation.
- Developmental BiologybioRxivPreprint
A Spatiotemporal and Machine-Learning Platform Accelerates the Manufacturing of hPSC-derived Esophageal Mucosa
Ying Yang, Carmel Grace McCullough, Lucas Seninge…·Anthony E. Oro
The paper develops a spatiotemporal multi-omics platform and machine-learning tool to manufacture hPSC-derived esophageal mucosa.
- Developmental Biologynpj Regenerative MedicinePeer-reviewed
Opposing roles for TGFbeta and BMP-signaling during nascent alveolar differentiation in the developing human lung
Tristan Frum, Peggy P. Hsu, Renee F. C. Hein…·Jason R. Spence
This study identifies opposing roles for TGFbeta and BMP signaling in generating AT2-like cells from lung progenitors in vitro.
15 citations