Alli Jimenez

Coordinated Brain-Network Dynamics of Maternal Adaptation

This study identifies distinct neural networks in mice during maternal stages and behaviors, showing their role in maternal adaptation and stress susceptibility.

Contributions of Folded and Disordered Domains to RNA Binding by HNRNPR

This study identifies RNA binding domains in HNRNPR, showing that RRM3 and a C-terminal charged region are critical for RNA binding, and reveals specific interactions with G-quadruplexes.

Massively parallel characterization of RNA G-quadruplex stability and molecular recognition

The paper characterizes RNA G-quadruplex stability and recognition by ligands and proteins using a synthetic library and reverse-transcriptase stop sequencing.

Early Life Stress induces brain-wide electrical network predisposition to migraine

This study shows early life stress increases vulnerability to migraine by altering brain network activity in response to CGRP.

Robust mammalian RNA localization elements are complex and multipartite

The paper identifies that mammalian RNA localization elements are large, complex, and multipartite, requiring specific subsequences for function.

G4mer: An RNA language model for transcriptome-wide identification of G-quadruplexes and disease variants from population-scale genetic data

G4mer identifies G-quadruplexes and disease variants from population-scale genetic data, improving accuracy and highlighting sequence features affecting rG4 formation.

Transcriptomic Evaluation of Stress Vulnerability Network using Single Cell RNA-Seq in mouse Prefrontal Cortex

This study uses scRNA-seq in mouse prefrontal cortex to identify gene expression patterns associated with stress vulnerability network activity, finding key roles for astrocytes, glutamatergic neurons, and GABAergic neurons.