bioRxivBiophysicsPreprint
Structural insights into distinct signaling profiles of the μOR activated by diverse agonists
Q. Qu, W. Huang, D. Aydin, J. M. Paggi, A. B. Seven, H. Wang, S. Chakraborty, T. Che, J. F. DiBerto, M. J. Robertson, A. Inoue, B. L. Roth, S. Majumdar, R. O. Dror, B. K. Kobilka, G. Skiniotis
Abstract
Drugs targeting the G protein-coupled -opioid receptor (OR) are the most effective analgesics available but are also associated with fatal respiratory depression. While some partial opioid agonists appear to be safer than full agonists, the signaling pathways responsible for respiratory depression have yet to be elucidated. Here we investigated the structural and mechanistic basis of action of lofentanil (LFT) and mitragynine pseudoindoxyl (MP), two OR agonists with different safety profiles. LFT, one of the most potent and lethal opioids, and MP, a derivative from the kratom plant with reduced respiratory depression in animal studies at equianalgesic doses, exhibited markedly different signaling efficacy profiles for G protein subtype activation and recruitment of {beta}-arrestins. Cryo-EM structures of the OR-Gi1 complex with MP (2.5[A]) and LFT (3.2[A]) revealed that the two ligands engage distinct sub-pockets, and molecular dynamics (MD) simulations showed additional differences in the binding site that propagate to the intracellular side of the receptor where G proteins and {beta}-arrestins bind. While MP favors the precise G protein-bound active state observed in the cryo-EM structures, LFT favors a distinct active state. These results highlight how drugs engaging different parts of the OR orthosteric pocket can lead to distinct signaling outcomes.
- organism: human
- assay: structural biology
- research focus: host-pathogen & immune response
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Transition Intermediates Encode Ligand Efficacy at the μ-Opioid Receptor-Gi Protein Complex
Kirill A. Konovalov, Dylan Novack, … Marta Filizola·bioRxiv·Sep 8, 2026
- Molecular mechanisms of fentanyl mediated β-arrestin biased signaling
P. W. de Waal, J. Shi, … B. Dickson·PLOS Computational BiologyPeer-reviewed·Apr 10, 2020
- Buprenorphine Restricts the Conformational Landscape of the μ-Opioid Receptor
Simone Aureli, Maria Bzówka, … Francesco Luigi Gervasio·bioRxiv·Jun 16, 2026
- How mu-Opioid Receptor Recognizes Fentanyl
Q. N. Vo, P. Mahinthichaichan, … C. R. Ellis·bioRxiv·Aug 16, 2020
- Structure-based Evolution of G protein-biased μ-opioid Receptor Agonists
H. Wang, F. Hetzer, … P. Gmeiner·bioRxiv·Mar 22, 2022
- The in vitro functional profiles of fentanyl and nitazene analogs at the μ-opioid receptor - high efficacy is dangerous regardless of signaling bias
M.-H. M. Tsai, L. Chen, … L. Shi·bioRxiv·Nov 10, 2023