Author

G. Deng

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 4 Cell Biology· 1 Pathology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:host-pathogen & immune response· 3 Approach:statistical model· 3 Organism:Arabidopsis· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Organism:plant (other)· 2 Assay:proteomics· 2

Frequent Co-Authors

D. Lozano-Claros· 2 shared E. Custovic· 2 shared J. Whelan· 2 shared J. Zhang· 2 shared M. G. Lewsey· 2 shared W. He· 2 shared W. Zhang· 2 shared B. A. Toth· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersPlant Biology

D. Lozano-Claros

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Author profile →

7 papers

Recent·Most cited

Two haplotype-resolved genomes of highly heterozygous AAB allotriploid bananas provide insights into subgenome asymmetric evolution and banana wilt control

W. Xie, Y. Zheng, W. He, F. Bi, Y. Li, T. Dou, R. Zhou, Y. Guo, G. Deng, W. Zhang, M. Yuan, P. Sanz-Jimenez, X. Zhu, X. Xu, Z. Zhou, , L. Chen

This study presents haplotype-resolved genomes of triploid bananas, revealing subgenome asymmetric evolution and resistance mechanisms against banana wilt.

bioRxiv · Mar 28, 2023 · PreprintPlant Biology

Hypomorphism of a novel long ERα isoform causes severe reproductive dysfunctions in female mice

K. Saito, J. E. Dickey, S. R. Rodeghiero, B. A. Toth, M. J. Kelly, Y. Deng, U. Singh, G. Deng, J. Jiang, H. Cui

This study identifies a novel long ERα isoform enriched in female reproductive tissues and shows its critical role in reproductive function in female mice.

bioRxiv · Mar 22, 2022Physiology

ColorBayes: Improved color correction of high-throughput plant phenotyping images to account for local illumination differences

D. Lozano-Claros, E. Custovic, G. Deng, J. Whelan, M. G. Lewsey

ColorBayes improves color correction in plant phenotyping images by accounting for local illumination differences using Bayesian inference.

bioRxiv · Mar 1, 2022 · PreprintPlant Biology

Identification and Characterization of Stem Cells in Mammalian Esophageal Stratified Squamous Epithelia

Y. Yang, G. Deng, L. Qiao, H. Yuan, X. Yu, L. Xu, S.-H. Lu, W. Jiang, X. Yu

This study identifies and characterizes quiescent stem cells in the mammalian esophageal epithelium using scRNA-seq and DNA methylation profiling in rat models.

bioRxiv · Nov 11, 2021Cell Biology

ITRAQ-based quantitative proteomic analysis of japonica rice seedling during cold stress

D. Qing, Y. Pan, G. Dai, L. Gao, H. Liang, W. Zhou, W. Chen, J. Li, J. Huang, J. Gao, H. Wu, C. Lu, K. Liu, G. Deng

This study uses iTRAQ-based proteomics to identify cold stress-responsive proteins in japonica rice seedlings, finding 289 regulated proteins involved in photosynthesis and metabolism.

bioRxiv · Aug 19, 2021Plant Biology

SARS-CoV-2 Quasispecies provides insight into its genetic dynamics during infection

F. Sun, X. Wang, S. Tan, Y. Dan, Y. Lu, J. Zhang, J. Xu, Z. Tan, X. Xiang, Y. Zhou, W. He, X. Wan, W. Zhang, Y. Chen, W. Tan, G. Deng

The paper analyzes SARS-CoV-2 quasispecies structure using SMRT sequencing, revealing a One-King model with dominant and minor haplotypes and their evolutionary dynamics.

bioRxiv · Aug 20, 2020 · PreprintPathology

Developmental Normalization of Phenomics Data Generated by High Throughput Plant Phenotyping Systems

D. Lozano-Claros, X. Meng, E. Custovic, G. Deng, O. Berkowitz, J. Whelan, M. G. Lewsey

The paper introduces DAPD, a normalization method for plant phenomics data, which reduces variance and improves measurement uniformity compared to sowing-time normalization.

bioRxiv · May 17, 2020Plant Biology