Author

Y. Tsukamoto

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Cell Biology· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:mouse· 3 Research Focus:cell type annotation· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. Chazan· 1 shared A. E. Frazier· 1 shared A. Molina-Marquez· 1 shared A. Otake· 1 shared A. Pushkarev· 1 shared A. Rozenberg· 1 shared A. Takeda· 1 shared A. Tojo· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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Curved chords = mutual co-authorship

1 shared paperMicrobiology

A. Chazan

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics

T. Qaqorh, Y. Takahashi, K. Otani, I. Yazawa, Y. Nishida, Y. Fujihara, M. Honda, S. Oki, Y. Ohkawa, D. R. Thorburn, A. E. Frazier, A. Takeda, Y. Ikeda, H. Sakaguchi, T. Watanabe, , Y. Shintani

This study identifies Atf3 as a key regulator of transition from compensation to dysfunction in female mitochondrial cardiomyopathy using single-cell transcriptomics.

bioRxiv · Sep 11, 2023Cell Biology

TLR7/8 stress response drives histiocytosis in SLC29A3 disorders

K. Miyake, T. Shibata, R. Sato, M. Taoka, S.-I. Saitoh, M. Komine, K. Yamaguchi, S. Goyama, Y. Motoi, J. Kitaura, K. Izawa, Y. Yamauchi, Y. Tsukamoto, T. Ichinohe, E. Fujita, , T. Taguchi

This study identifies TLR7/8 as drivers of histiocytosis in SLC29A3 disorders by responding to lysosomal nucleoside stress and enhancing monocyte proliferation and phagocyte maturation.

bioRxiv · Oct 27, 2022Immunology

Energy transfer in ubiquitous rhodopsin pumps with xanthophyll antennas

A. Chazan, I. Das, T. Fujiwara, S. Murakoshi, W. Shihoya, A. Rozenberg, A. Molina-Marquez, S. Larom, A. Pushkarev, P. Malakar, S. Ruhman, M. Hasegawa, Y. Tsukamoto, T. Ishizuka, M. Konno, , O. Beja

The paper detects energy transfer from hydroxylated carotenoids to rhodopsin proton pumps in marine and freshwater bacteria.

bioRxiv · Aug 24, 2022Microbiology

Comprehensive O-GlcNAc glycoproteomics on NOTCH1 EGF repeats implicated unique Lewis X epitopes in mammals

Y. Tsukamoto, M. Ogawa, K. Yogi, H. Takeuchi, T. Okajima

The paper identifies unique Lewis X epitopes on NOTCH1 EGF repeats through O-GlcNAc glycoproteomics, revealing structural diversity and fucosylation patterns in mammals.

bioRxiv · Nov 2, 2021 · PreprintBiochemistry