Author
Shahin Rafii
Weill Cornell MedicineORCID 0000-0001-5605-1067Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2021-2026 · peak 4/yrCo-Author Collaboration Network
10 top collaborators · 28 mutual co-author linksMutual co-authors in cluster
9 papers
Recent·Most cited
- ImmunologybioRxivPreprint
Generation of hypoimmunogenic gastric insulin-secreting organoids
Anna Ada Dattoli, Matthew E. Brown, Bradley Pearson…·Xiaofeng Huang
This study generates hypoimmunogenic gastric insulin-secreting organoids (GINS) and shows PD-L1 engineering improves their survival under immune challenge.
DOI 10.64898/2026.07.08.736836 - PathologyLeukemiaPeer-reviewed
Spatial remodeling of bone marrow architecture defines tissue-state signatures of disease activity and therapeutic response in myelodysplastic neoplasms
Ryan Nachman, Aleksandra Kopacz, Caitlin Unkenholz…·Sanjay S. Patel
This study uses spatial imaging to identify architectural changes in bone marrow that predict disease activity and response to therapy in myelodysplastic neoplasms.
- Cell BiologyBiology of ReproductionPeer-reviewed
Restoration of Spermatogenesis is Dependent on Activation of a SPRY4-ERK Checkpoint Following Germline Stem Cell Damage
Ying Liu, Tansol Choi, Brad Pearson…·Todd Evans
This study shows that SPRY4-ERK signaling acts as a checkpoint to restore spermatogenesis after germline stem cell damage, with its loss leading to impaired regeneration and fertility.
DOI 10.1093/biolre/ioag063 - Developmental BiologyNature CommunicationsPeer-reviewed
A MTA2-SATB2 chromatin complex restrains colonic plasticity toward small intestine by retaining HNF4A at colonic chromatin
Wei Gu, Xiaofeng Huang, Pratik Narendra Pratap Singh…·Qiao Zhou
The paper identifies MTA2 and SATB2 as a chromatin complex that maintains colonic identity by retaining HNF4A on colonic chromatin, preventing plasticity toward small intestine.
8 citations - Developmental BiologybioRxivPreprint
Differentiation latency, cell division symmetry, and dormancy signatures define fetal liver HSCs at single cell resolution
Takashi Ishida, Juliane I Mercoli, Adam M. Heck…·Brandon Hadland
The paper identifies rare fetal liver HSCs with unique features like differentiation latency and dormancy signatures using single cell RNA-sequencing and a niche-mimicking culture platform.
- Developmental BiologyDevelopmental CellPeer-reviewed
Transcription factor induction of vascular blood stem cell niches in vivo
Elliott J. Hagedorn, Julie R. Perlin, Rebecca J. Freeman…·Leonard Ira Zon
This study identifies transcription factors that induce vascular blood stem cell niches in vivo, enabling synthetic niche generation and potential therapeutic applications.
19 citations - Developmental BiologyCell ReportsPeer-reviewed
Multipotent progenitors and hematopoietic stem cells arise independently during the endothelial to hematopoietic transition in the early mouse embryo
Tessa Dignum, Barbara Varnum‐Finney, Sanjay R Srivatsan…·Brandon Hadland
The paper shows that multipotent progenitors and HSC arise from distinct HE populations during mouse embryogenesis, identified through clonal assays and single-cell transcriptomics.
- Developmental BiologybioRxivPreprint
Engineering a niche supporting haematopoietic stem cell development using integrated single cell transcriptomics
Brandon Hadland, Barbara Varnum‐Finney, Stacey Dozono…·Irwin D. Bernstein
The paper identifies key signaling molecules involved in HSC development by analyzing single-cell transcriptomics data from AGM-derived cells and uses them to engineer a supportive niche for HSC generation.