Author

Michal Mark

Weizmann Institute of ScienceORCID 0000-0002-7083-4364Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

Nir YosefiD· 2 shared Abdalla AhmediD· 1 shared Adrienne LuomaiD· 1 shared Agne AntanaviciuteiD· 1 shared Albert BurgeriD· 1 shared Alexander V. PredeusiD· 1 shared Alexandre Denadai‐SouzaiD· 1 shared Alison SimmonsiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersSystems Biology

Nir YosefORCID

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3 papers

Recent·Most cited

The Human Gut Cell Atlas v1.0: A Unified, Community-Built Reference of Cellular Diversity Across the Gut

Kyle Kimler, Christopher Lance, Balázs Bohár, Abdalla Ahmed, Ran RZ Zhou, Raquel Bartolomé-Casado, Victòria Gudiño, Ricardo O. Ramirez Flores, Fredrik V. Junghus, Urs Mörbe, Diana Domańska, Michaela F. Mueller, Madelyn R. Moy, Ángela Sanzo-Machuca, Marton L. Olbei, , Kathryn E. Hamilton

The paper presents the Human Gut Cell Atlas v1.0, a unified reference of gut cell diversity, revealing how tissue structure influences cellular composition and enabling disease and organoid analysis.

bioRxiv · Oct 12, 2026 · PreprintSystems Biology

Aging-Associated Microbiota Drives Treg Dysfunction via TNF Signaling

Jefferson Antônio Leite, Zeynep Ergün, Emmanouil Stylianakis, Rebecca Jasser, Florian Ingelfinger, Natalia Notarberardino Bos, Aysan Poursadegh Zonouzi, Michal Mark, Katlynn Carter, Xinyuan Liu, Nadine Hövelmeyer, Tommy Regen, Manolis Pasparakis, Christian Neumann, Ido Amit, , Ari Waisman

This study shows that aging microbiota impairs Treg cell function through TNF signaling, leading to inflammation and immune aging.

bioRxiv · Aug 8, 2025 · PreprintImmunology

A dominant role of TGFβ in regulating T-cell size and physiology

Inbal Eizenberg-Magar, Jacob Rimer, Stav Miller, Yehezqel Elyahu, Michal Mark, Ziv Porat, Shlomit Reich-Zeliger, Alon Monsonego, Yaron E. Antebi, Nir Friedman

This study shows TGFβ profoundly regulates T-cell size and physiology by modulating gene expression and transcription factor networks, independent of other cytokines.

bioRxiv · Jun 2, 2024 · PreprintImmunology