Songjie Chen

Interlaboratory comparison of standardised metabolomics and lipidomics analyses in human and rodent blood using the MxP(R) Quant 500 kit

This study evaluates the interlaboratory reproducibility of the MxP(R) Quant 500 metabolomics/lipidomics kit across human and rodent blood samples, showing high consistency and reliability.

Deep Learning-based Pseudo-Mass Spectrometry Imaging Analysis for Precision Medicine

The paper introduces deepPseudoMSI, a deep learning framework that converts LC-MS data into pseudo-MS images for improved disease diagnosis in precision medicine.

Longitudinal Urine Metabolic Profiling and Gestational Age Prediction in Pregnancy

The paper uses longitudinal urine metabolomics to predict gestational age with a machine-learning model, showing non-invasive pregnancy dating potential.

Patient-derived gene and protein expression signatures of NGLY1 deficiency

The paper characterizes gene and protein expression changes in NGLY1 deficiency using patient-derived cells and provides a web resource for the data.

metID: A R package for automatable compound annotation for LC-MS-based data

metID automates compound annotation for LC-MS data by integrating multiple databases, improving efficiency and reproducibility.

Integration and comparison of multi-omics profiles of NGLY1 deficiency plasma and cellular models to identify clinically relevant molecular phenotypes

This study integrates metabolomics and proteomics data from NGLY1 deficiency patient samples and cellular models to identify molecular phenotypes linked to immune activation and metabolic disturbances.

Molecular Choreography of Acute Exercise

The paper characterizes the dynamic multi-omic molecular response to acute exercise and identifies biomarkers of fitness.