bioRxivBioinformaticsPreprint
Universal activation mechanism of class A GPCRs
Qingtong ZhouiD, Dehua YangiD, Meng WuiD, Yu GuoiD, Wangjing Guo, Zhong LiiD, Xiaoqing CaiiD, Antao DaiiD, Eugene I. ShakhnovichiD, Zhi‐Jie LiuiD, Raymond C. StevensiD, M. Madan BabuiD, Ming‐Wei WangiD, Suwen ZhaoiD
Abstract
Class A G protein-coupled receptors (GPCRs) influence virtually every aspect of human physiology. GPCR activation is an allosteric process that links agonist binding to G protein recruitment, with the hallmark outward movement of transmembrane helix 6 (TM6). However, what leads to TM6 movement and the key residue-level changes of this trigger remain less well understood. Here, by analyzing over 230 high-resolution structures of class A GPCRs, we discovered a modular, universal GPCR activation pathway that unites previous findings into a common activation mechanism, directly linking the bottom of ligand-binding pocket with G protein-coupling region. We suggest that the modular nature of the universal GPCR activation pathway allowed for the decoupling of the evolution of the ligand binding site, G protein binding region and the residues important for receptor activation. Such an architecture might have facilitated GPCRs to emerge as a highly successful family of proteins for signal transduction in nature.
- organism: human
- assay: protein structure
- research focus: protein structure prediction
- approach: statistical model
- Citations
- 3
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Who's driving? Common evolutionary mechanism of activation of class A GPCRs
Antoni Marciniak, Paweł Kozielewicz, … Lucie Delemotte·bioRxiv·Jun 30, 2026
- Unique Features of Different Classes of G-Protein-Coupled Receptors Revealed from Sequence Coevolutionary and Structural Analysis
Hung Nguyen Do, Allan Haldane, … Yinglong Miao·Proteins Structure Function and BioinformaticsPeer-reviewed·Oct 4, 2021
- A non-canonical mechanism of GPCR activation
Alexander S. Powers, Aasma A. Khan, … Ron O. Dror·Nature CommunicationsPeer-reviewed·Nov 16, 2024
- All roads lead to Rome: Emergence of Mechanistic Divergence Shapes Activation of Class B1 G-Protein Coupled Receptors
Prateek D. Bansal, Diwakar Shukla·bioRxiv·Jan 5, 2026
- Activation mechanism of class A GPCRs: machine learninganalysis of experimental structural databases
Santeri Elias Paajanen, Felix Eurasto, … Ilpo Vattulainen·bioRxiv·Mar 27, 2026
- Intracellular Passage Of Na+ In An Active State G Protein Coupled Receptor
o. N. Vickery, C. A. Carvalheda, … U. Zachariae·bioRxiv·Jul 21, 2017