Author

Markus P. Kummer

AbbVie (Germany)ORCID 0000-0002-0993-2918Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:drug response / drug discovery· 1 Organism:mouse· 1

Frequent Co-Authors

Aldo BorrotoiD· 1 shared Astrid WachteriD· 1 shared Balbino AlarcóniD· 1 shared Brian KimiD· 1 shared Carina HabichiD· 1 shared Eric R. GoedkeniD· 1 shared Frederic BrosseroniD· 1 shared Guadalupe PereyraiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperNeuroscience

Aldo BorrotoORCID

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Author profile →

3 papers

Recent·Most cited

NGN2 Expression and Regional Patterning Allow Rapid Differentiation from hiPSCs to DRG-Like Neurons Responsive to Type 2 Cytokines

Carina Habich, Loan N. Miller, Nivea Granillo Luz, Laraib Iqbal Malik, Kavya Chegireddy, Mohammad Mehdi Maneshi, Michael Wolf, Markus P. Kummer, Hisato Iriki, Julian Röwe, Samuele G. Marro, Victoria Scott, Kathleen M. Smith, Brian Kim, Peter Reinhardt, Eric R. Goedken

This study generates DRG-like neurons from hiPSCs using NGN2 overexpression and patterning factors, which respond to type 2 cytokines involved in itch.

bioRxiv · Aug 27, 2025 · PreprintNeuroscience

SFRP1 shapes astrocyte to microglia cross-talk in acute and chronic neuroinflammation

Javier Rueda‐Carrasco, María Jesús Martín‐Bermejo, Guadalupe Pereyra, María Inés Mateo, Aldo Borroto, Frederic Brosseron, Markus P. Kummer, Stephanie Schwartz, José P. López‐Atalaya, Balbino Alarcón, Pilar Esteve, Michael Thomas Heneka, Paola Bovolenta

This study shows that SFRP1 from astrocytes promotes microglial activation in acute and chronic neuroinflammation, suggesting it as a therapeutic target.

EMBO Reports · Sep 27, 2021Peer-reviewedNeuroscience

ABACUS: A flexible UMI counter that leverages intronic reads for single-nucleus RNAseq analysis

Hualin Simon Xi, Lauren Gibilisco, Markus P. Kummer, Knut Biber, Astrid Wachter, Maya E. Woodbury

ABACUS improves sNuc-RNAseq analysis by incorporating intronic reads, doubling the number of identified nuclei in human brain data and enhancing cluster resolution.

bioRxiv · Nov 13, 2020 · PreprintBioinformatics