Information processing-like phenotype of human brain organoids
Hongwei CaiiD, Chunhui TianiD, Yang YangiD, Yantao XingiD, Zheng AoiD, Quan WangiD, Hengyao NiuiD, Nian WangiD, Omer RevahiD, Keith A. VosseliD, Jungsu KimiD, Orly ReineriD, Mingxia GuiD, Feng GuoiD
Abstract
Human brain organoids recapitulate key physiological features and functions of the human brain and hold remarkable potential for studying neurological diseases. Despite clinical evidence suggesting that neurodegenerative diseases impair the information-processing ability of the human brain, the capacity of brain organoids for information processing and its relationship to neural network function remain largely unexplored. Here, we test and quantify information-processing-like properties of human cortical organoids using a task-based functional phenotyping framework (Brainopheno). We demonstrate the pattern-processing-like phenotype of cortical organoids through the representation and classification of evoked neural activities in response to distinct spatial input stimulation patterns via a microelectrode array (MEA) system. Moreover, this functional phenotype emerges with network maturation and is disrupted by pharmacological perturbations, linking classification performance to the functional integrity of organoid neural networks (ONNs). Importantly, this functional phenotype also reveals functional deficits in ONNs altered by a familial Alzheimer's disease (AD)-associated gene mutation (APP) and by monocytes from patients with sporadic AD. This work may establish a new quantifiable functional phenotype of neural organoids and provide a framework to bridge molecular and cellular profiles with neural circuit function for basic neurology, disease phenotyping, and therapeutic development.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- High-density extracellular recordings from the interior of intact brain organoids enable automated high-throughput functional assay
Fan Wu, Cuthbert Steadman, … Bilal Çakır·bioRxiv·Sep 12, 2025
- Identification of neural oscillations and epileptiform changes in human brain organoids
Ranmal Aloka Samarasinghe, Osvaldo A. Miranda, … Bennett G. Novitch·Nature NeurosciencePeer-reviewed·Aug 23, 2021
- Human brain organoid networks
Tal Sharf, Tjitse van der Molen, … Kenneth S. Kosik·Nature CommunicationsPeer-reviewed·Jul 29, 2022
- Nested oscillatory dynamics in cortical organoids model early human brain network development
Cleber A. Trujillo, Richard Gao, … Alysson Renato Muotri·Cell stem cellPeer-reviewed·Aug 29, 2019
- Flexible 3D multimodal organoid interface reveals functional subnetworks and coordinated circuit activity in cortical organoids
Madison N. Wilson, Elizabeth K. Kharitonova, … Duygu Kuzum·bioRxiv·Oct 8, 2026
- Advanced Complexity and Plasticity of Neural Activity in Reciprocally Connected Human Cerebral Organoids
Tatsuya Osaki, Yoshiho Ikeuchi·bioRxiv·Feb 16, 2021