bioRxivCancer BiologyPreprint
Subtractive Interaction Proteomics Reveal a Network of Signaling Pathways Activated by an Oncogenic Transcription Factor in Acute Myeloid Leukemia
Nathalie Guillen, Maria Wieske, Andreas Otto, Afsar Ali MianiD, Michal Rokicki, Carol Guy, Caroline AlvaresiD, Paul Hole, Hannelore Held, Oliver Gerhard OttmanniD, Dörte BecheriD, Marieangela Wilson, Kate J. HeesomiD, Martin RuthardtiD, Claudia ChirichesiD
Abstract
Acute myeloid leukemias (AML) are characterized by recurrent genomic alterations, often in transcriptional regulators, which form the basis on which current prognostication and therapeutic intervention is overlaid. In AML transformation can often be attributed to single chromosomal aberrations encoding oncogenes, such as t(15;17)-PML/RAR or t(6;9)-DEK/CAN but it is unclear how these aberrant transcription factors drive leukemic signaling and influence cellular responses to targeted therapies. Here we show that by using a novel \"subtractive interaction proteomics\" approach, the high risk AML-inducing oncogene t(6;9)-DEK/CAN directly activates signaling pathways that are driven by the ABL1, AKT/mTOR, and SRC family kinases. The interplay of these signaling pathways creates a network with nodes that are credible candidates for combinatorial therapeutic interventions. These results reveal specific interdependencies between nuclear oncogenes and cancer signaling pathways thus providing a foundation for the design of therapeutic strategies to better address the complexity of cancer signaling.\n\nGraphical Abstract\n\nO_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=173 SRC=\"FIGDIR/small/464958_ufig1.gif\" ALT=\"Figure 1\">\nView larger version (28K):\norg.highwire.dtl.DTLVardef@159295corg.highwire.dtl.DTLVardef@aa83d1org.highwire.dtl.DTLVardef@b41e11org.highwire.dtl.DTLVardef@122156e_HPS_FORMAT_FIGEXP M_FIG C_FIG
- organism: human
- assay: proteomics
- research focus: cell signaling & trafficking
- research focus: drug response / drug discovery
- research focus: cell type annotation
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- PROTAC-Mediated Targeting of IKKβ and NR4A1 for AML Therapy
Chandra Kumar Maharjan, Yi Liu, … Weizhou Zhang·OncogenePeer-reviewed·Jul 30, 2026
- A JAK/STAT-Mediated Inflammatory Signaling Cascade Drives Oncogenesis In AF10-Rearranged AML
B. Chen, A. Deshpande, … A. Deshpande·bioRxiv·Aug 31, 2020
- TOE1 influences canonical Wnt signalling in myeloid leukaemia cells through LEF-1 modulation and regulates the proliferation of haematopoietic cells through PAK2.
- CD59 organizes the plasma membrane to sustain oncogenic Ras-MAPK signaling and is a targetable vulnerability in acute myeloid leukemia
Abdula Maher, Dhanoop Manikoth Ayyathan, … Steven M. Chan·bioRxiv·Aug 12, 2026
- PU.1 and MYC transcriptional network defines synergistic drug responses to KIT and LSD1 inhibition in acute myeloid leukemia
B. M. Smith, J. VanCampen, … T. P. Braun·bioRxiv·Aug 24, 2021
- Integrin signaling is critical for myeloid-mediated support of T-cell acute lymphoblastic leukemia
A. Lyu, S. H. Nam, … L. I. R. Ehrlich·bioRxiv·Jan 5, 2022