Arteriosclerosis Thrombosis and Vascular BiologyBioinformaticsPeer-reviewed journal article
Female gene networks are expressed in myofibroblast-like smooth muscle cells in vulnerable atherosclerotic plaques.
Ernest Diez BenaventeiD, Santosh KarnewariD, Michele F. BuonoiD, Eloi MiliiD, Robin J. G. HartmaniD, Daniek KapteijniD, Lotte SlendersiD, Mark Daniels, Rédouane AherrahrouiD, Tobias ReinbergeriD, Barend M. MoliD, Gert Jan de BorstiD, Dominique P.V. de KleijniD, Koen H.M. PrangeiD, Marie A.C. DepuydtiD, Menno P.J. de WintheriD, Johan KuiperiD, Johan BjörkegreniD, Jeanette ErdmanniD, Mete CivelekiD, Michal MokrýiD, Gary K. OwensiD, Gerard PasterkampiD, Hester M. den RuijteriD
Abstract
Women presenting with coronary artery disease (CAD) more often present with fibrous atherosclerotic plaques, which are currently understudied. Phenotypically modulated smooth muscle cells (SMCs) contribute to atherosclerosis in women. How these phenotypically modulated SMCs shape female versus male plaques is unknown. Here, we show sex-stratified gene regulatory networks (GRNs) from human carotid atherosclerotic tissue. Prioritization of these networks identified two main SMC GRNs in late-stage atherosclerosis. Single-cell RNA-sequencing mapped these GRNs to two SMC phenotypes: a phenotypically modulated myofibroblast-like SMC network and a contractile SMC network. The myofibroblast-like GRN was mostly expressed in plaques that were vulnerable in females. Finally, mice orthologs of the female myofibroblast-like genes showed retained expression in advanced plaques from female mice but were downregulated in male mice during atherosclerosis progression. Female atherosclerosis is driven by GRNs that promote a fibrous vulnerable plaque rich in myofibroblast-like SMCs.
- organism: human
- assay: bulk RNA-seq
- assay: scRNA-seq
- research focus: gene regulatory network inference
- research focus: differential expression
- research focus: cell type annotation
- approach: statistical model
- approach: experimental assay
- Citations
- 35
- FWCI
- 3.84
- Field percentile
- top 5%
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