Author

Shihui Zhao

Peking University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Jianbin WangiD· 2 shared Yanyi HuangiD· 2 shared Yuhong PangiD· 2 shared Bo LiuiD· 1 shared Chen ZhangiD· 1 shared Chenxi YuiD· 1 shared Chunhong ZhengiD· 1 shared Dongfang LiuiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioengineering

Jianbin WangORCID

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2 papers

Recent·Most cited

High-plex spatial RNA imaging in one round with conventional microscopes using color-intensity barcodes

Tianyi Chang, Shihui Zhao, Kunyue Deng, Zhizhao Liao, Mingchuan Tang, Yanxi Zhu, Wuji Han, Chenxi Yu, Wenyi Fan, Mengcheng Jiang, Guanbo Wang, Dongfang Liu, Jirun Peng, Yuhong Pang, Peng Fei, , Yanyi Huang

This paper introduces PRISM, a method for high-plex spatial RNA imaging using color intensity barcodes, validated across multiple tissues and showing the role of CAFs in tumor microenvironments.

Nature Biotechnology · Oct 30, 2025Peer-reviewedBioengineering

Rapid and sensitive single cell RNA sequencing with SHERRY2

Lin Di, Bo Liu, Yuzhu Lyu, Shihui Zhao, Yuhong Pang, Chen Zhang, Jianbin Wang, Hai Qi, Jie Shen, Yanyi Huang

SHERRY2 is a single-cell RNA sequencing protocol that improves sensitivity and accuracy by eliminating second-strand cDNA synthesis, outperforming existing methods in detecting low-abundance transcripts and specific gene functions.

BMC Biology · Sep 29, 2022Peer-reviewedGenomics