Author

Y. Matsuoka

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Cell Biology· 2 Cancer Biology· 1 Immunology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:cell type annotation· 4 Research Focus:development & morphogenesis· 3 Research Focus:gene regulatory network inference· 3 Organism:bacteria (other)· 2 Assay:bulk RNA-seq· 2 Approach:genetic perturbation / CRISPR· 2 Research Focus:host-pathogen & immune response· 2

Frequent Co-Authors

A. Monteiro· 4 shared C. Luongo· 2 shared C. Santos· 2 shared H.-S. Park· 2 shared L. Yang· 2 shared P. Lusso· 2 shared P. Zhang· 2 shared S. N. Murugesan· 2 shared

Activity by Year

2018-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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4 shared papersEvolutionary Biology

A. Monteiro

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

Identification of genes supporting cold resistance of mammalian cells: lessons from a hibernator

M. Sone, N. Mitsuhashi, Y. Sugiura, Y. Matsuoka, R. Maeda, A. Yamauchi, R. Okahashi, J. Yamashita, K. Sone, S. Enju, D. Anegawa, Y. Yamaguchi

This study identifies Gpx4 and ferroptosis-suppressing pathways as key to cold resistance in hibernator cells, showing their potential to enhance cold tolerance in non-hibernators.

bioRxiv · Dec 27, 2023Cell Biology

Evolution of wheat blast resistance gene Rmg8 accompanied by differentiation of variants recognizing the powdery mildew fungus

S. Asuke, K. Morita, M. Shimizu, F. Abe, R. Terauchi, C. Nago, Y. Takahashi, M. Shibata, M. Yoshioka, M. Iwakawa, M. Kishi-Kaboshi, Z. Su, S. Nasuda, H. Handa, M. Fujita, , Y. Tosa

The paper traces the evolutionary origin of wheat blast resistance gene Rmg8 and shows its ability to recognize both wheat blast and powdery mildew pathogens.

bioRxiv · Sep 26, 2023 · PreprintPlant Biology

Live-attenuated pediatric parainfluenza vaccine expressing 6P-stabilized SARS-CoV-2 spike protein is protective against SARS-CoV-2 variants in hamsters

X. Liu, H.-S. Park, Y. Matsuoka, C. Santos, L. Yang, C. Luongo, I. Moore, R. Johnson, N. Garza, P. Zhang, P. Lusso, S. Best, U. Buchholz, C. Le Nouën

This study compares two live-attenuated vaccines in hamsters, showing that B/HPIV3/S-6P induces stronger immune responses and better protection against SARS-CoV-2 variants than B/HPIV3/S-2P.

PLOS Pathogens · Jun 23, 2023Peer-reviewedMicrobiology

Lepidopteran prolegs are novel traits, not leg homologs

Y. Matsuoka, S. N. Murugesan, A. Prakash, A. Monteiro

The paper investigates whether lepidopteran prolegs are serial homologs of thoracic legs, finding they are novel traits with distinct gene regulatory networks.

bioRxiv · Jun 30, 2022Evolutionary Biology

Intranasal pediatric parainfluenza virus-vectored SARS-CoV-2 vaccine candidate is protective in macaques

C. Le Nouen, C. E. Nelson, X. Liu, H.-S. Park, Y. Matsuoka, C. Luongo, C. Santos, L. Yang, R. Herbert, A. Castens, I. N. Moore, T. Wilder-Kofie, R. Moore, A. Walker, P. Zhang, , U. J. Buchholz

This study evaluates an intranasal parainfluenza virus-vectored SARS-CoV-2 vaccine in macaques, showing it induces mucosal and systemic immunity and protects against viral challenge.

bioRxiv · May 21, 2022Immunology

Ultrabithorax modifies a regulatory network of genes essential for butterfly eyespot development in a wing sector-specific manner

Y. Matsuoka, A. Monteiro

The paper investigates how the gene Ultrabithorax (Ubx) regulates a three-gene network for eyespot development in butterfly wings, revealing sector-specific regulatory differences between forewings and hindwings.

bioRxiv · Mar 20, 2022Evolutionary Biology

Butterfly eyespots evolved via co-option of the antennal gene-regulatory network

S. N. Murugesan, H. Connahs, Y. Matsuoka, M. d. Gupta, M. Huq, V. Gowri, S. Monroe, K. D. Deem, T. Werner, Y. Tomoyasu, A. Monteiro

The paper shows butterfly eyespots evolved by repurposing the antennal gene-regulatory network, using transcriptome analysis and CRISPR experiments to demonstrate shared genetic control.

bioRxiv · Mar 1, 2021 · PreprintEvolutionary Biology

Hox genes are essential for the development of novel serial homologous eyespots on the wings of Bicyclus anynana butterflies

Y. Matsuoka, A. Monteiro

This study shows that Hox genes Antp and Ubx are essential for eyespot development in Bicyclus anynana butterflies, with Antp also required for silver scales in males.

bioRxiv · Oct 22, 2019Evolutionary Biology

Effects of decreased Rac activity and malignant state on oral squamous cell carcinoma

H. Al-Shareef, Y. Matsuoka, M. Kogo, H. Nakahara

This study examines how Rac inhibition affects apoptosis in different grades of oral squamous cell carcinoma cells, showing varying responses based on malignancy grade and JNK activation.

bioRxiv · Feb 4, 2019Cancer Biology

Automatic Single-Cell Discrimination by Cellular Appearance using Convolutional Neural Network

Y. Matsuoka, R. Nakatsuka, T. Fujioka

This paper shows that a convolutional neural network can classify hematopoietic tumor cell lines with >90% accuracy using bright-field images.

bioRxiv · Oct 30, 2018Cell Biology