BCLAF1 links RNA splicing to ATF4-dependent metabolic adaptation in acute myeloid leukemia
Laura López-HernándeziD, Stephanie J. CrowleyiD, Sara Cea-SáncheziD, Ricardo de ArellanoiD, Neetij Krishnan, Patrick Toolan-KerriD, Lynn S. White, Domenico Ignoti, Emily Soto-HidalgoiD, Stefano GustincichiD, Román González‐PrietoiD, Luca PandolfiniiD, Isaia BarbieriiD, Patricia Altea‐ManzanoiD, Jeffrey A. MageeiD, Jeffrey J. BednarskiiD, Gonzalo Millán-ZambranoiD
Abstract
Acute myeloid leukemia (AML) is driven by a combination of genetic alterations and non-mutational mechanisms that disrupt normal hematopoiesis and support leukemic cell survival. While the mutational landscape of AML is well characterized, the non-genetic processes that sustain leukemic maintenance remain comparatively less understood. Using human AML cell lines and murine models of AML, we identify BCL2-associated transcription factor 1 (BCLAF1) as a key regulator of leukemic progression through control of mRNA processing. BCLAF1 physically associates with core spliceosome components and regulates alternative splicing, with a predominant effect on intron retention. We demonstrate that BCLAF1 is required for the productive splicing of activating transcription factor 4 (ATF4) mRNA, thereby sustaining ATF4 protein expression. Loss of BCLAF1 reduces ATF4 protein levels, leading to downregulation of metabolic target genes and disruption of de novo amino acid biosynthesis. Furthermore, depletion of BCLAF1 sensitizes AML cells to venetoclax, a clinically relevant BCL-2 inhibitor. Together, these findings uncover a previously unrecognized role for BCLAF1 in coordinating mRNA splicing and metabolic adaptation in AML, highlighting its potential as a therapeutic target. Statement of significanceAberrant RNA splicing and metabolic reprogramming are hallmarks of cancer, yet how these processes are mechanistically linked remains unclear. This study identifies BCLAF1 as a key regulator connecting splicing control to amino acid metabolism in acute myeloid leukemia, revealing a previously unrecognized functional vulnerability at the intersection of these pathways.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 1
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Broad de-regulated U2AF1 splicing is prognostic and augments leukemic transformation via protein arginine methyltransferase activation
Meenakshi Venkatasubramanian, Leya Y Schwartz, … Nathan Salomonis·Science Translational MedicinePeer-reviewed·May 7, 2025
- A PTBP1-CDC42 splicing axis regulates leukemia growth and venetoclax sensitivity in acute myeloid leukemia
Margaux Oberling, Mathieu Landry, … Margherita Ghisi·bioRxiv·Aug 26, 2026
- Aberrant splicing in B-cell acute lymphoblastic leukemia
K. L. Black, A. S. Naqvi, … A. Thomas-Tikhonenko·Nucleic Acids ResearchPeer-reviewed·Oct 24, 2018
- The eukaryotic translation initiation factor eIF4E reprogrammes the splicing machinery anddrives alternative splicing
- ADAR2-repressed RNA editing: a novel mechanism contributing to t (8:21) AML leukemogenesis
M. Guo, T. H. M. Chan, … D. G. Tenen·bioRxiv·Oct 18, 2021
- RNA splicing alterations induce a cellular stress response associated with poor prognosis in AML
G. Anande, N. P. Deshpande, … J. E. Pimanda·Clinical Cancer ResearchPeer-reviewed·Jul 15, 2020