Author
A. B. Ward
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2018-2023 · peak 21/yrCo-Author Collaboration Network
10 top collaborators · 44 mutual co-author links76 papers
Recent·Most cited
- ImmunologybioRxivPreprintDOI 10.1101/2021.06.15.447100
- ImmunologybioRxivPreprint
Protective pan-ebolavirus combination therapy by two multifunctional human antibodies
P. Gilchuk, C. D. Murin, R. W. Cross…·J. E. Crowe
This paper develops a therapeutic cocktail of two human antibodies that protect against multiple ebolaviruses in non-human primates and reveals their molecular mechanisms.
DOI 10.1101/2021.05.02.442324 - ImmunologybioRxivPreprint
From Structure to Sequence: Identification of polyclonal antibody families using cryoEM
A. Antanasijevic, C. A. Bowman, R. N. Kirchdoerfer…·A. B. Ward
This paper uses cryoEM and next-generation sequencing to identify monoclonal antibodies from polyclonal sera and validate their antigen-binding properties.
DOI 10.1101/2021.04.13.439712 - ImmunologyPLOS PathogensPeer-reviewed
Elicitation of potent serum neutralizing antibody responses in rabbits by immunization with an HIV-1 clade C trimeric Env derived from an Indian elite neutralizer
R. Kumar, S. Deshpande, L. M. Sewall…·J. Bhattacharya
This study shows that immunization with a thermostable HIV-1 clade C Env trimer induces potent autologous neutralizing antibodies in rabbits, with distinct epitope specificity compared to natural infection.
DOI 10.1371/journal.ppat.1008977 - MicrobiologybioRxiv
Murine monoclonal antibodies against RBD of SARS-CoV-2 neutralize authentic wild type SARS-CoV-2 as well as B.1.1.7 and B.1.351 viruses and protect in vivo in a mouse model in a neutralization dependent manner
F. Amanat, S. Strohmeier, W.-H. Lee…·F. Krammer
This study evaluates murine monoclonal antibodies against SARS-CoV-2 RBD, showing neutralization of wild-type and variants, and in vivo protection dependent on neutralization.
DOI 10.1128/mbio.01002-21 - ImmunologybioRxivPreprint
Ultrapotent bispecific antibodies neutralize emerging SARS-CoV-2 variants
H. Cho, K. K. Gonzales-Wartz, D. Huang…·J. Tan
This study identifies ultrapotent bispecific antibodies that neutralize emerging SARS-CoV-2 variants by targeting multiple spike protein regions, showing efficacy in vitro and in a hamster model.
DOI 10.1101/2021.04.01.437942 - ImmunologybioRxivPreprint
A public broadly neutralizing antibody class targets a membrane-proximal anchor epitope of influenza virus hemagglutinin
J. J. Guthmiller, J. Han, H. A. Utset…·P. C. Wilson
This study identifies a class of broadly neutralizing antibodies targeting a conserved membrane-proximal epitope on influenza HA, showing their induction by a chimeric HA vaccine.
DOI 10.1101/2021.02.25.432905 - ImmunologybioRxiv
Disassembly of HIV envelope glycoprotein trimer immunogens is driven by antibodies elicited via immunization
H. L. Turner, R. Andrabi, C. A. Cottrell…·A. B. Ward
This study shows that off-target antibodies from HIV trimer vaccines cause trimer disassembly, exposing more off-target epitopes and driving further off-target immune responses.
DOI 10.1126/sciadv.abh2791 - MicrobiologybioRxiv
Structural and functional ramifications of antigenic drift in recent SARS-CoV-2 variants
M. Yuan, D. Huang, C.-C. D. Lee…·I. A. Wilson
The paper examines how mutations at E484 and K417 in SARS-CoV-2 variants affect neutralizing antibodies, showing reduced efficacy against certain antibody families but not others.
DOI 10.1126/science.abh1139 - MicrobiologybioRxiv
A combination of cross-neutralizing antibodies synergizes to prevent SARS-CoV-2 and SARS-CoV pseudovirus infection
H. Liu, M. Yuan, D. Huang…·I. A. Wilson
This study shows that combining cross-neutralizing antibodies CV38-142 and COVA1-16 enhances neutralization of SARS-CoV-2 and SARS-CoV pseudoviruses.
DOI 10.1016/j.chom.2021.04.005 - ImmunologybioRxiv
Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM
A. Antanasijevic, L. M. Sewall, C. A. Cottrell…·A. B. Ward
The paper uses cryoEM to analyze polyclonal antibody responses to HIV Env immunogens in rhesus macaques, revealing structural differences in antibody binding and immunogenicity of engineered mutations and glycan sites.
DOI 10.1038/s41467-021-25087-4 - ImmunologybioRxiv
Canonical features of human antibodies recognizing the influenza hemagglutinin trimer interface
S. J. Zost, J. Dong, I. M. Gilchuk…·J. E. Crowe
The paper identifies common genetic and structural features of human antibodies recognizing the influenza HA trimer interface, suggesting it as a target for vaccine design.
DOI 10.1172/jci146791 - MicrobiologybioRxiv
Neutralizing antibodies induced by first-generation gp41-stabilized HIV-1 envelope trimers and nanoparticles
S. Kumar, X. Lin, T. Ngo…·J. Zhu
This study isolates HIV-1 neutralizing antibodies from mice and rabbits immunized with gp41-stabilized trimers and nanoparticles, showing they target different epitopes and elicit Env-dependent breadth.
- MicrobiologyCellPeer-reviewed
SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2
T. M. Clausen, D. R. Sandoval, C. B. Spliid…·J. D. Esko
This study shows SARS-CoV-2 spike protein binds to heparan sulfate and ACE2 on cells codependently, forming a complex that facilitates infection, suggesting potential therapeutic targets.
DOI 10.1016/j.cell.2020.09.033 - BiophysicsProceedings of the National Academy of SciencesPeer-reviewed
Visualization of the HIV-1 Env Glycan Shield Across Scales
Z. T. Berndsen, S. Chakraborty, X. Wang…·A. B. Ward
This study uses cryo-EM, computational modeling, and mass-spectrometry to analyze the HIV-1 Env glycan shield's structure and dynamics, revealing how heterogeneity and interactions affect epitope accessibility and trimer stability.
- MicrobiologybioRxivPreprint
High-resolution mapping of the neutralizing and binding specificities of polyclonal rabbit serum elicited by HIV Env trimer immunization
A. S. Dingens, P. Pratap, K. Malone…·J. D. Bloom
This study maps the neutralizing and binding specificities of polyclonal rabbit serum against HIV Env trimers using mutational antigenic profiling and EMPEM.
DOI 10.1101/2020.10.21.348623 - ImmunologybioRxiv
Convergence of a common solution to broad ebolavirus neutralization by glycan cap directed human antibodies
C. D. Murin, P. Gilchuk, P. Ilinykh…·A. B. Ward
The paper presents cryo-EM structures of glycan cap antibodies that neutralize ebolavirus by targeting a conserved MLD-anchor site, revealing common features among broadly neutralizing antibodies.
DOI 10.1016/j.celrep.2021.108984 - ImmunologybioRxiv
Cross-reactive serum and memory B cell responses to spike protein in SARS-CoV-2 and endemic coronavirus infection
G. Song, W.-t. He, S. Callaghan…·R. Andrabi
The paper examines cross-reactive serum and memory B cell responses to SARS-CoV-2 and endemic coronaviruses, finding weak serum cross-reactivity but stronger memory B cell cross-reactivity.
DOI 10.1038/s41467-021-23074-3 - MicrobiologybioRxiv
A natural mutation between SARS-CoV-2 and SARS-CoV determines neutralization by a cross-reactive antibody
N. C. Wu, M. Yuan, S. Bangaru…·I. A. Wilson
This study identifies a single amino acid mutation that determines the difference in neutralization ability of a cross-reactive antibody between SARS-CoV-2 and SARS-CoV.
DOI 10.1371/journal.ppat.1009089 - MicrobiologybioRxiv
Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines
L. He, A. Chaudhary, X. Lin…·J. Zhu
This study designs and tests Ebola virus vaccines using stabilized GP trimers displayed on nanoparticles, showing they induce neutralizing antibodies and enhance infection.
- ImmunologybioRxiv
Structural analysis of full-length SARS-CoV-2 spike protein from an advanced vaccine candidate
S. Bangaru, G. Ozorowski, H. L. Turner…·A. B. Ward
The paper uses cryo-EM and glycan analysis to study the structure of a full-length SARS-CoV-2 spike protein in a vaccine candidate, revealing its stable prefusion conformation and novel trimer interactions.
- MicrobiologybioRxiv
Cross-neutralization of a SARS-CoV-2 antibody to a functionally conserved site is mediated by avidity
H. Liu, N. C. Wu, M. Yuan…·I. A. Wilson
The paper identifies a SARS-CoV-2 antibody that cross-neutralizes SARS-CoV by binding a conserved epitope and relies on avidity for neutralization.
DOI 10.1016/j.immuni.2020.10.023 - MicrobiologybioRxiv
An alternative binding mode of IGHV3-53 antibodies to the SARS-CoV-2 receptor binding domain
N. C. Wu, M. Yuan, H. Liu…·I. A. Wilson
This study identifies an alternative binding mode of IGHV3-53 antibodies to the SARS-CoV-2 RBD, showing that longer CDR H3 can bind with different angles and interactions.
DOI 10.1016/j.celrep.2020.108274 - BiophysicsbioRxiv
A strain-specific inhibitor of receptor-bound HIV-1 targets a pocket near the fusion peptide and offers a template for drug design
G. Ozorowski, J. L. Torres, D. Santos-Martins…·A. B. Ward
The paper identifies a strain-specific HIV-1 inhibitor targeting a pocket near the fusion peptide, demonstrating small molecules can disrupt viral fusion and offering a template for drug design.
- BiophysicsbioRxiv
Quantification of the Resilience and Vulnerability of HIV-1 Native GlycanShield at Atomistic Detail
S. Chakraborty, Z. T. Berndsen, N. W. Hengartner…·S. Gnanakaran
The paper quantifies the resilience and vulnerability of HIV-1's glycan shield using atomistic modeling and graph theory, revealing new insights into its structure and potential for immunogen design.
- ImmunologybioRxiv
Networks of HIV-1 envelope glycans maintain antibody epitopes in the face of glycan additions and deletions
G. E. Seabright, C. A. Cottrell, M. J. van Gils…·M. Crispin
The paper investigates how HIV-1 envelope glycan networks affect the formation and stability of broadly neutralizing antibody epitopes, showing their importance in immunogen design.
DOI 10.1016/j.str.2020.04.022 - MicrobiologybioRxiv
Vulnerabilities in coronavirus glycan shields despite extensive glycosylation
Y. Watanabe, Z. T. Berndsen, J. Raghwani…·M. Crispin
This study identifies vulnerabilities in coronavirus glycan shields by showing that MERS S protein has under-processed oligomannose-type glycan clusters, unlike SARS and HKU1 CoVs, and that these glycans do not form an effective shield against antibodies.
DOI 10.1038/s41467-020-16567-0 - ImmunologybioRxiv
Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates
C. A. Cottrell, J. van Schooten, C. A. Bowman…·M. J. van Gils
This study maps antibody responses to HIV-1 envelope trimers in non-human primates, identifying strain-specific and conserved epitopes recognized by vaccine-induced antibodies.
DOI 10.1371/journal.ppat.1008753 - ImmunologybioRxiv
Structural and functional evaluation of de novo-designed, two-component nanoparticle carriers for HIV Env trimer immunogens
A. Antanasijevic, G. Ueda, J. Copps…·A. B. Ward
The paper evaluates de novo-designed two-component nanoparticles for presenting HIV Env trimers, showing improved antibody responses through multivalent display.
DOI 10.1371/journal.ppat.1008665