Author

Arya J. Bahrami

Nanostring Technologies (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Assay:spatial transcriptomics· 3 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Jason ReevesiD· 2 shared Prajan DivakariD· 2 shared Abigail Wong-RolleiD· 1 shared Alecksandr J. Kutchma· 1 shared Alexa E Lasley· 1 shared Andrew Klock· 1 shared Aric B.E. RiningeriD· 1 shared Ashley Lam· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersCancer Biology

Jason ReevesORCID

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Author profile →

3 papers

Recent·Most cited

The Pdgfd-Pdgfrb axis orchestrates tumor-nerve crosstalk in pancreatic cancer

Peter L. Wang, Nicole A. Lester, Ella N. Perrault, Jennifer Su, Dennis H. Gong, Carina Shiau, Jingyi Cao, Phuong Trang Nguyen, Jung Woo Bae, Deniz Olgun, Hannah I. Hoffman, Ashley Lam, Jean Huang-Gao, Saifur Rahaman, Jimmy A. Guo, , William L. Hwang

This study identifies Pdgfd-Pdgfrb signaling as a driver of perineural invasion in pancreatic cancer by promoting cancer cell invasiveness and nerve engagement.

bioRxiv · Aug 26, 2025 · PreprintCancer Biology

Single Cell Spatial Transcriptomics Reveals Immunotherapy-Driven Bone Marrow Niche Remodeling in AML

Gege Gui, Molly A. Bingham, Julius R. Herzog, Abigail Wong-Rolle, Laura Williams Dillon, Meghali Goswami, Eddie Martin, Jason Reeves, Sean T. Kim, Arya J. Bahrami, Hermann Franz Degenhardt, George Zaki, Prajan Divakar, Edward C. Schrom, Katherine R. Calvo, , Chen Ning Zhao

CosMx spatial transcriptomics of bone marrow from 6 refractory/relapsed AML patients shows CD14+ monocytes rising in leukemia-cell neighborhoods after pembrolizumab in responders, dendritic cells in nonresponders.

Science Advances · Jul 9, 2025Peer-reviewedCancer Biology✦ In-depth digest

Spatially resolved whole transcriptome profiling in human and mouse tissue using Digital Spatial Profiling

Stephanie M. Zimmerman, Robin Fropf, Bridget R. Kulasekara, Maddy Griswold, Oliver K. Appelbe, Arya J. Bahrami, Rich Boykin, Derek L. Buhr, Kit A. Fuhrman, Margaret L. Hoang, Quoc Huynh, Lesley Isgur, Andrew Klock, Alecksandr J. Kutchma, Alexa E Lasley, , Joseph Beechem

Multiplexed in situ hybridization pools against every protein-coding gene let Digital Spatial Profiling read whole transcriptomes from regions of ~10-500 cells in human and mouse tissue.

bioRxiv · Sep 29, 2021 · PreprintGenomics