Topic · Genetics · Medicine
Glioma Diagnosis and Treatment
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
503 papers
- Systems BiologyInterdisciplinary Sciences Computational Life SciencesPeer-reviewed
- Cancer BiologyLife SciencesPeer-reviewed
KHDRBS3 facilitates self-renewal and temozolomide resistance of glioblastoma cell lines
Kanokkuan Somrit, Sucheewin Krobthong, Yodying Yingchutrakul…·Waraporn Komyod
This study identifies KHDRBS3 as a factor promoting self-renewal and temozolomide resistance in glioblastoma stem-like cells, suggesting it as a potential therapeutic target.
4 citations - Cancer BiologyActa NeuropathologicaPeer-reviewed
Epigenetic landscape reorganization and reactivation of embryonic development genes are associated with malignancy in IDH-mutant astrocytoma
Santoesha A. Ghisai, Levi van Hijfte, W. R. Vallentgoed…·Youri Hoogstrate
This study identifies DNA-methylation and RNA-expression signatures that improve grading of IDH-mutant astrocytomas beyond current methods.
21 citations - Cancer BiologyCell ReportsPeer-reviewed
ERK signaling promotes resistance to TRK kinase inhibition in NTRK fusion-driven glioma mouse models.
Sebastian Schmid, Zachary R. Russell, Alex Shimura Yamashita…·Frank Szulzewsky
This study shows ERK signaling promotes resistance to TRK inhibitors in NTRK fusion-driven glioma mouse models and suggests MEK inhibition as a potential combination therapy.
9 citations - Cancer BiologyNeoplasiaPeer-reviewed
Probing the glioma micro-environment: analysis using biopsy in combination with ultra-fast cyclic immunolabeling
Thomas S. van Solinge, Juhyun Oh, Erik R. Abels…·Marike L. D. Broekman
This study develops a repeat-biopsy model in mice combined with ultra-fast cycling technology to analyze immune response changes in gliomas over time and in response to treatment.
- Cancer BiologyCancer CellPeer-reviewed
Integrated electrophysiological and genomic profiles of single cells reveal spiking tumor cells in human glioma
Rachel Naomi Curry, Qianqian Ma, Malcolm F. McDonald…·Akdes Serin Harmancı
The paper identifies hybrid cells in human glioma with both neuronal and glial electrophysiological and transcriptomic features using Patch-sequencing and a new computational tool.
54 citationstop 1% - Cancer BiologybioRxivPreprint
A pontine-specific axonal niche supports de novo gliomagenesis
Zhigang Xie, Adrija Pathak, Vytas A. Bankaitis
This study identifies the trigeminal root entry zone as a pontine-specific niche that supports gliomagenesis driven by H3.1K27M and co-occurring mutations.
DOI 10.1101/2024.09.04.611079 - NeuroscienceNeoplasiaPeer-reviewed
PDGF-BB overexpression in p53 null oligodendrocyte progenitors increases H3K27me3 and induces transcriptional changes which favor proliferation
Dennis Huang, Angeliki Mela, Natarajan V. Bhanu…·Patrizia Casaccia
This study shows that PDGF-BB overexpression in p53 null OPCs increases H3K27me3 and promotes proliferation by altering transcription.
2 citations - Cancer BiologybioRxivPreprint
Oncometabolite-driven enhancer hypermethylation promotes a hyporesponsive microglial state in IDH-mutant gliomas
Alice Laurenge, Pietro Pugliese, Sarah Scuderi…·Luis Jaime Castro‐Vega
This study shows that oncometabolite D-2HG drives enhancer hypermethylation in IDH-mutant gliomas, leading to hyporesponsive microglia and reduced immune reactivity.
3 citations - Cancer BiologybioRxivPreprint
Modelling medulloblastoma pathogenesis and treatment in human cerebellar organoids.
Thomas Willott, James G Nicholson, Yunchen Xiao…·Silvia Marino
This study generates human cerebellar organoids to model medulloblastoma subgroups G3 and G4, showing their ability to sustain tumor growth and respond to anti-tumour compounds.
2 citations - Cancer BiologybioRxivPreprint
Cleavage of the vascular matrix attracts glioblastoma cells to infiltrate the brain parenchyma
Lara Perryman, Anette M. Høye, Thomas R. Cox…·Janine Terra Erler
This study identifies LOX-mediated cleavage of the vascular matrix as a mechanism driving glioblastoma infiltration and suggests targeting LOX as a therapeutic strategy.
DOI 10.1101/2024.08.02.606279 - Cancer BiologyCancer CellPeer-reviewed
Thyroid Hormone Suppresses Medulloblastoma Progression Through Promoting Terminal Differentiation of Tumor Cells
Yijun Yang, Silvia Anahi Valdés-Rives, Qing Liu…·Zeng-jie Yang
This study shows thyroid hormone promotes differentiation of medulloblastoma cells, reducing tumor growth by reversing EZH2-mediated repression of NeuroD1.
20 citations - NeurosciencebioRxivPreprint
Individualized Cerebellar Damage Predicts the Behavioral Disorders in Children with Brainstem Tumors
Heyuan Jia, Kaikai Wang, Mingxin Zhang…·Liwei Zhang
The paper identifies cerebellar damage patterns in children with brainstem tumors and links them to specific behavioral disorders using segmentation and predictive modeling.
- NeurosciencebioRxivPreprint
Normative Growth Modeling of Cortical Thickness Identify Neuroanatomical Variability and Distinct Subtypes in Brainstem Tumor Patients
Heyuan Jia, Kai‐Kai Wang, Peng Zhang…·Liwei Zhang
This study identifies two cortical thickness subtypes in brainstem tumor patients using normative modeling, linking them to tumor growth patterns and clinical outcomes.
- Cancer BiologybioRxivPreprint
A neurovascular progenitor sits at the nexus of glioblastoma lineage trajectories
Elisa Fazzari, Daria J. Azizad, Kwanha Yu…·Aparna Bhaduri
This study identifies a neurovascular progenitor cell type in glioblastoma that links distinct malignant lineages and influences tumor composition and survival.
7 citations - Cancer BiologybioRxivPreprint
The single-cell make-up of adult diffuse glioma based on the 2021 WHO classification
Iyad Alnahhas, Allison Kayne, Marium Nadeem Khan, Wenyin Shi
This paper applies a fetal neural progenitor cell classification to adult diffuse gliomas, finding distinct THY1-CD24-EGFR+ and THY1-CD24-EGFR- cell populations across IDH mutant and IDHwt gliomas.
- NeuroscienceCancer Gene TherapyPeer-reviewed
Constitutively active TrkB kinase signalling reduces actin filopodia dynamics and cell migration
Rohini Gupta, Melanie Dittmeier, Gisela Wohlleben…·Robert Blum
This study shows that constitutive TrkB kinase signalling, independent of ligand, reduces actin filopodia dynamics and cell migration, and can be inhibited by Trk inhibitors.
7 citations - Cancer BiologybioRxivPreprint
Cellular and molecular events organizing the assembly of tertiary lymphoid structures in glioblastoma
Alessandra Vaccaro, Fan Yang, Tiarne van de Walle…·Anna Dimberg
This study identifies cellular and molecular mechanisms of tertiary lymphoid structure (TLS) formation in glioblastoma, showing TLS correlate with improved survival and are driven by CD4 T cells expressing lymphotoxin β.
- Systems BiologybioRxivPreprint
The Role of Biopsy Position and Tumor-Associated Macrophages for Predictions on Recurrence of Malignant Gliomas: An In Silico Study
Pejman Shojaee, Edwin Weinholtz, Nadine S. Schaadt, Haralampos Hatzikirou
This paper uses an in-silico model to show that localized biopsies and macrophage density at the tumor edge improve predictions of recurrence in high-grade gliomas.
- Cancer BiologybioRxivPreprint
Differential Gene Expression in MRI-classified Glioblastoma
Christopher T. Rhodes, Yufeng Wang, Chin‐Hsing Annie Lin
This study integrates MRI and genomic data from GBM patients to identify common molecular signatures and link them to tumor locations, highlighting dysregulated neurotransmitter receptors and synaptic activity.
DOI 10.1101/2024.06.21.600091 - Cancer BiologybioRxivPreprint
Adult-type diffuse gliomas share recurring cell states driven by a common astrocyte-like glioma stem cell population
Walter Muskovic, Ashraf Zaman, Madhavi Pandya…·Joseph E. Powell
This study identifies recurring cell states across adult-type diffuse gliomas and reveals a shared astrocyte-like glioma stem cell population driving intratumoural heterogeneity.
- Cancer BiologybioRxivPreprint
GABA production induced by imipridones is a targetable and imageable metabolic alteration in diffuse midline gliomas
Georgios Batsios, Suresh Udutha, Céline Taglang…·Pavithra Viswanath
This study shows imipridones induce GABA accumulation in diffuse midline gliomas, which can be used for non-invasive imaging and therapy.
2 citations - Systems BiologyScience AdvancesPeer-reviewed
Gene Regulatory Network topology governs resistance and treatment escape in glioma stem-like cells
James Hugh Park, Parvinder Hothi, Adrián López García de Lomana…·Nitin S. Baliga
The paper shows how gene regulatory network topology in glioma stem-like cells influences drug resistance and treatment escape, suggesting strategies to overcome resistance through combinatorial therapies.
- GenomicsbioRxivPreprint
The inactive X chromosome drives sex differences in microglial inflammatory activity in human glioblastoma
Marla E. Tharp, Claudia Z. Han, Maya Talukdar…·David C. Page
The paper identifies sex differences in microglial inflammatory responses in glioblastoma, showing that genes on the inactive X chromosome drive these differences.
6 citations - Cancer BiologybioRxivPreprint
CTPS1 inhibition synergizes with replication stress signaling inhibition in MYC-amplified Group 3 medulloblastoma
Matthew R. Hathaway, Katherine E. Gadek, H. L. Jagana…·Myron K. Evans
This study identifies CTPS1 as a vulnerability in MYC-driven medulloblastoma and shows that combining CTPS1 and CHK1 inhibition synergistically reduces tumor growth in vivo.
1 citation - Cancer BiologybioRxivPreprint
Spatial Transcriptomic Sequencing of a DIPG-infiltrated Brainstem reveals Key Invasion Markers and Novel Ligand-Receptor Pairs contributing to Tumour to TME Crosstalk
Anja Kordowski, Onkar Mulay, Xiao Tan…·Bryan W. Day
This study uses spatial transcriptomics to analyze a DIPG-infiltrated brainstem, identifying invasion markers and ligand-receptor pairs involved in tumour-TME crosstalk.
DOI 10.1101/2024.05.07.593050 - Genetic & Genomic MedicinemedRxivPreprint
Towards accesible brain-tumor classification at the point of care Nanopore methylation sequencing from Formalin Fixed Paraffin Embedded (FFPE) pathology samples
Galina Feinberg‐Gorenshtein, Assaf Grunwald, Carlo Vermeulen…·Yuval Ebenstein
This paper develops a validated protocol for using Oxford Nanopore methylation sequencing on FFPE samples to classify brain tumors, enabling point-of-care diagnosis.
1 citation - Cancer BiologybioRxivPreprint
The mechanoreceptor PIEZO1 is a novel oncogene in glioma by promoting astrocyte reactivity
Pablo Blanco-Carlón, Miguel Ángel Navarro-Aguadero, Pedro Aguilar-Garrido…·María Velasco‐Estevez
This study identifies PIEZO1 as an oncogene in glioma that promotes astrocyte reactivity and is associated with worse prognosis in male patients.
2 citations - Cancer BiologybioRxivPreprint
Interneurons that BiTE: Harnessing the migratory capacity of cortical inhibitory interneuron precursors to treat high-grade glioma
Stephanie Nicole Brosius, William Manley, Kyra Harvey…·Thomas De Raedt
This paper develops a method using migratory cortical interneuron precursors to deliver therapeutic agents directly to glioblastoma, improving survival in mice.
1 citation