Xiaoyu Tracy Cai

HALO: Hierarchical Causal Modeling for Single Cell Multi-Omics Data

HALO models temporal causal relations in single-cell multi-omics data by distinguishing coupled and decoupled latent representations, revealing lineage specification dynamics in AT2 cells.

Aging Fly Cell Atlas Identifies Exhaustive Aging Features at Cellular Resolution

The paper presents an aging Drosophila cell atlas, identifies cell type-specific aging patterns, and shows ribosomal gene expression as a conserved aging predictor.

The learning curve of murine subretinal injection among clinically trained ophthalmic surgeons

This paper evaluates the learning curve for subretinal injection in mice among ophthalmic surgeons, finding a significant improvement in success rate after 364 training cases.

Fly Cell Atlas: a single-cell transcriptomic atlas of the adult fruit fly

The paper creates a single-cell transcriptomic atlas of the adult fruit fly, identifying over 250 cell types and analyzing gene signatures and sexual dimorphism across tissues.