Gut microbiota and health

The paper assesses oral and gut microbiomes in Javan slow lorises to evaluate release readiness, finding oral microbiome changes correlate with dental perturbations.

This study examines how human gut microbiomes respond to cadmium exposure, identifying distinct responses based on microbial composition and highlighting the role of Anaerostipes in Cd resilience.

MeLSI learns data-adaptive distance metrics for microbiome community composition analysis, improving detection of biologically meaningful differences compared to fixed metrics.

The paper links gut microbiome composition and predicted functions to growth and behavior in Japanese preschool children, showing distinct microbial signatures for different behavioral domains.

This study examines gut microbiota and short-chain fatty acid (SCFA) levels in children with new-onset type 1 diabetes (T1D) with and without diabetic ketoacidosis (DKA), finding reduced SCFAs and SCFA-producing bacteria in DKA patients.

This study investigates interactions between low-calorie sweeteners and xenobiotics on gut bacteria, finding synergistic effects that alter bacterial growth and host cell responses.

The paper identifies a fasting-induced microbiome-metabolite-chromatin axis that primes intestinal stem cells for regeneration after radiation injury.

This paper develops a hydrogel-based therapy using functionalized Bifidobacterium longum to treat colitis-associated anxiety and depression by targeting both gut and brain inflammation.

The paper identifies rare IAA-producing gut bacteria and links IAA synthesis to OFOR-driven amino acid oxidation in acetogens.

This paper shows the gut microbiota regulates intestinal T cell development by directing vitamin A flux through a sequential pathway involving epithelial, myeloid, and T cells.

This study shows that a perturbed small intestinal microbiota from stunted children can induce EED-like features in offspring through inflammation and immune changes.

This study shows that disrupting the spinal cord-gut axis alters gut microbial dynamics and carbohydrate cross-feeding, with interventions restoring health.

This study examines how ceftiofur antibiotic treatment and E. coli inoculation affect the calf fecal microbiome using shotgun metagenomics and single-cell sequencing.

This study investigates microbial dysbiosis in children with cystic fibrosis, identifying glycerol as a driver of altered microbial competition and linking colibactin production to increased colorectal cancer risk.

This study links gut transit time, inferred from stool consistency, to microbial metabolites and microbiota in infants, showing associations with breastfeeding, bile acid metabolism, and short-chain fatty acids.

This study identifies microbiota-derived short-chain fatty acids as key mediators of Candida albicans colonization resistance in the gut.

The paper investigates the link between gut microbiota composition and item recognition in healthy humans, finding that alpha diversity and beta diversity are associated with memory performance.

This study examines how bile acid modulation affects colonic epithelial responses in mice and humans, finding altered cell populations and gene expression associated with DCA exposure.

The paper links infant gut microbiome composition and behavioral responses to maternal unpredictability, showing how microbial metabolism influences behavioral outcomes.

This study shows that butyrate, a short-chain fatty acid, modulates dendritic cell development and surface molecule expression through epigenetic mechanisms and transcription factors.

This study compares taxonomic and functional profiles of human gut microbiome samples sequenced on two platforms, finding high taxonomic concordance but functional discrepancies.

This study develops a voluntary feeding protocol to non-invasively colonize mice with A. muciniphila and shows rapid and stable colonization in both healthy and dysbiotic gut microbiota.

This study shows that circadian disruption causes sex-specific changes in gut microbiota and bioactive lipid profiles, with distinct adaptations in males and females.

The paper develops PolyProf, a method to profile polymorphic toxin systems in metagenomes, showing it predicts microbiome development and disease-related dysbiosis.

The paper analyzes the canine gut microbiome across 900 dogs to identify factors influencing microbiome composition and develops a metagenomics-based aging clock.

This paper uses NLP to analyze gut microbiome studies in malnourished African children, identifying microbial signatures and associations with malnutrition.

This study integrates microbiome and host transcriptome data from mice to show diet, age, and genetics influence gut microbiota, with machine learning models predicting body weight and age with high accuracy.