Author
T. Li
Montefiore Medical Center
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
Click to filter author papersSignature Assays, Organisms & Methods
Click to filter · or open tagActivity by Year
2017-2026 · peak 41/yrCo-Author Collaboration Network
10 top collaborators · 36 mutual co-author links163 papers
Recent·Most cited
- BiochemistrybioRxivPreprintDOI 10.1101/2020.06.09.143438
- MicrobiologyScientific ReportsPeer-reviewed
Analysis of cell-associated DENV RNA by oligo(dT) primed 5' capture scRNAseq
M. A. Sanborn, T. Li, K. Victor…·A. Waickman
This study uses 5' capture scRNAseq to detect and quantify DENV RNA in infected cells, revealing viral sequence variability and identifying infected cell types.
- Cell BiologybioRxiv
Inhibition of TRPV1 and TRPA1 by mosquito and mouse saliva
T. Li, S. Derouiche, Y. Sakai…·M. Tominaga
This study identifies mosquito and mouse saliva as inhibitors of TRPV1 and TRPA1 channels, with sialorphin as a candidate antinociceptive peptide, and confirms antinociceptive effects in vivo.
DOI 10.1097/j.pain.0000000000002337 - MicrobiologybioRxivPreprint
Co-evolution of Eukaryotic-like Vps4 and ESCRT-III Subunits in the Asgard Archaea
This study shows that Asgard archaea possess ESCRT complexes with eukaryotic-like structural and functional features, suggesting they are evolutionary precursors to eukaryotic ESCRTs.
DOI 10.1101/2020.05.05.080093 - MicrobiologybioRxiv
Physiological and transcriptomic responses to N-deficiency and ammonium: nitrate shift in Fugacium kawagutii (Symbiodiniaceae)
This study examines how Fugacium kawagutii responds to nitrogen deficiency and different nitrogen forms, finding ammonium is preferentially used and identifying stable reference genes for future studies.
DOI 10.1016/j.scitotenv.2020.141906 - BioengineeringbioRxivPreprint
Embedded Enzyme Nanoclusters Depolymerize Polyesters via Chain-End Mediated Processive Degradation
C. DelRe, J. Kwon, P. Kang…·T. Xu
This paper demonstrates that enzyme nanoclusters can depolymerize polyesters via chain-end mediated processive degradation, enabling scalable bioactive plastics for efficient sorting.
DOI 10.1101/2020.04.25.052050 - MicrobiologybioRxivPreprint
Phenotypic heterogeneity in particle size is a viral mechanism of persistence
T. Li, Z. Li, E. E. Deans…·T. Ivanovic
This study shows that filamentous viral particles have a functional advantage over spherical ones in resisting neutralizing antibodies and fusion inhibitors.
DOI 10.1101/843177 - MicrobiologybioRxiv
Cross-reactive neutralization of SARS-CoV-2 by serum antibodies from recovered SARS patients and immunized animals
This study shows that antibodies from SARS-CoV survivors and immunized animals neutralize SARS-CoV-2, suggesting potential for broad-spectrum vaccines against emerging coronaviruses.
- MicrobiologybioRxivPreprint
Room-temperature-storable PCR Mixes for SARS-CoV-2 Detection
J. Xu, J. Wang, Z. Zhong…·N. Xia
This paper develops freeze-dried PCR mixes for SARS-CoV-2 detection that can be stored at room temperature, maintaining sensitivity and specificity for up to 28 days.
DOI 10.1101/2020.04.07.029934 - Animal Behavior & CognitionbioRxivPreprint
Panoramic visual representation in the dorsal visual pathway and its role in reorientatio
T. Li, A. Arleo, D. Sheynikhovich
The paper presents a spiking neural network model showing how time-integrated spatial views in the dorsal visual pathway enable panoramic representations for memory-based spatial reorientation and visual search.
DOI 10.1101/827667 - ImmunologybioRxivPreprint
Vitamin D receptor and STAT3 cooperate to establish TET2-mediated tolerogenesis
F. Catala-Moll, T. Li, L. Ciudad…·E. Ballestar
This study shows that VDR and STAT3 cooperate with TET2 to induce DNA demethylation and tolerogenesis in dendritic cells through vitamin D signaling.
DOI 10.1101/2020.02.28.969634 - Plant BiologybioRxiv
Global Dynamic Molecular Profiles of Stomatal Lineage Cell Development by Single-Cell RNA Sequencing
Z. Liu, Y. Zhou, J. Guo…·X. Sun
The paper uses single-cell RNA sequencing to analyze stomatal lineage cell development in Arabidopsis, identifying new marker genes and transcriptional networks.
DOI 10.1016/j.molp.2020.06.010 - BioengineeringbioRxivPreprint
Potent neutralization of 2019 novel coronavirus by recombinant ACE2-Ig
This study develops a recombinant ACE2-Ig fusion protein that neutralizes both SARS-CoV and 2019-nCoV in vitro, showing cross-reactivity and potential for diagnostic, prophylactic, and therapeutic applications.
DOI 10.1101/2020.02.01.929976 - BioengineeringbioRxiv
Super-resolved live-cell imaging using Random Illumination Microscopy
T. Mangeat, S. Labouesse, M. Allain…·A. Sentenac
This paper introduces Random Illumination Microscopy (RIM), a super-resolution technique that achieves high-resolution, low-toxicity, and fast imaging for live-cell studies.
DOI 10.1016/j.crmeth.2021.100009 - Cancer BiologybioRxivPreprint
Neutralizing PD-L1 and PD-L2 Enhances the Efficacy of Immune Checkpoint Inhibitors in Ovarian Cancer.
Y. R. Miao, K. N. Thakkar, J. Qian…·A. J. Giaccia
The paper develops a high-affinity sPD-1 decoy molecule that neutralizes both PD-L1 and PD-L2, showing superior antitumor activity in ovarian cancer models compared to PD-1/PD-L1 antibodies.
DOI 10.1101/2020.01.19.911941 - Cell BiologybioRxiv
Aurora B and Condensin are dispensable for chromosome arm and telomere separation during meiosis II
J. Berthezene, C. Reyes, T. Li…·S. Tournier
This study shows Aurora B and condensin are not required for telomere and chromosome arm separation during meiosis II in fission yeast.
DOI 10.1091/mbc.e20-01-0021 - MicrobiologybioRxiv
Prediction and Characterization of RXLR Effectors in Pythium Species
G. Ai, K. Yang, Y. Tian…·D. Dou
This paper identifies and characterizes 359 RXLR effectors in nine Pythium species, revealing evolutionary patterns and functional roles in host interactions.
DOI 10.1094/mpmi-01-20-0010-r - Evolutionary BiologybioRxivPreprint
Variation in the life history strategy of cells underlies tumor’s functional diversity
This study applies r- and K-selection to HeLa cells to show how life history strategies influence tumor functional diversity through gene expression and ecological competition.
DOI 10.1101/829135 - Plant BiologybioRxivPreprint
Live imaging-assisted domain-specific CRISPR genome editing at single cell resolution in plants
T. Li, A. Yan, E. M. Meyerowitz
The paper develops a domain-specific CRISPR-Cas9 system with live-imaging screening in Arabidopsis to study PIN1 function in tissue morphogenesis and mechanical stress response at single-cell resolution.
DOI 10.1101/793240 - Cancer BiologybioRxiv
Targeting aberrant DNA methylation in mesenchymal stromal cells as a treatment for myeloma bone disease
A. Garcia-Gomez, T. Li, J. Rodriguez-Ubreva…·E. Ballestar
This study identifies aberrant DNA methylation in mesenchymal stromal cells from myeloma patients and shows that targeting DNMTs and G9a with CM-272 reverses bone loss and reduces tumor burden.
DOI 10.1038/s41467-020-20715-x - ImmunologybioRxiv
PIRD: Pan immune repertoire database
W. Zhang, L. Wang, K. Liu…·X. Liu
PIRD is a database that collects and stores annotated TCR and BCR sequencing data, along with tools for visualization and analysis.
DOI 10.1093/bioinformatics/btz614 - BiochemistrybioRxivPreprint
Inhibiting Mycobacterium tuberculosis ClpP1P2 by addressing the equatorial handle domain of ClpP1 subunit
Y. Yang, Y. Zhu, T. Yang…·Y. Luo
This study shows cediranib inhibits Mycobacterium tuberculosis ClpP1P2 by targeting its equatorial handle domain, revealing conformational changes critical for its function and suggesting a strategy for species-specific inhibitors.
DOI 10.1101/713214 - ImmunologyClinical ImmunologyPeer-reviewed
Treatment of Murine Lupus with TIGIT-Ig
S. Liu, L. Sun, C. Wang…·S. Hu
This study shows that TIGIT-Ig treatment delays lupus onset, reduces autoantibodies, and improves survival in mice, suggesting potential for human autoimmune disease therapy.
DOI 10.1016/j.clim.2019.04.007 - Cancer BiologybioRxiv
Co-occurring alterations in the RAS-MAPK pathway limit response to MET inhibitor treatment in MET exon 14 skipping mutation positive lung cancer
J. K. Rotow, P. Gui, W. Wu…·C. M. Blakely
The paper identifies co-occurring RAS-MAPK pathway alterations in MET exon 14 skipping mutation positive lung cancers that limit response to MET inhibitors and suggests combining MET and MEK inhibitors to overcome resistance.
DOI 10.1158/1078-0432.ccr-19-1667 - EcologybioRxivPreprint
Phenological matching drives wheat pest range shift under climate change
Y. Wu, Z. Gong, D. Bebber…·W. Huang
This study shows that climate change has caused a northward shift in the range of wheat pests, leading to increased crop damage despite pesticide use.
DOI 10.1101/614743 - BioengineeringbioRxiv
Methods for the generation of heritable germline mutations in the disease vector Culex quinquefasciatus using CRISPR/Cas9.
M. Li, T. Li, N. Liu…·O. Akbari
The paper develops improved CRISPR/Cas9 methods for genome editing in Culex quinquefasciatus, achieving higher embryo survival and germline mutagenesis rates.
DOI 10.1111/imb.12626 - Animal Behavior & CognitionbioRxiv
Modeling place cells and grid cells in multi-compartment environments: hippocampal-entorhinal loop as a multisensory integration circuit
T. Li, A. Arleo, D. Sheynikhovich
This study presents a neural network model of the hippocampal-entorhinal loop to investigate how visual and self-motion cues influence spatial representation in multi-compartment environments.
DOI 10.1016/j.neunet.2019.09.002 - MicrobiologybioRxiv
Shotgun metagenomics reveals an enrichment of potentially cross-reactive bacterial epitopes in ankylosing spondylitis patients, as well as the effects of TNFi therapy and the host’s genotype upon microbiome composition
J. Yin, P. R. Sternes, M. Wang…·H. Xu
The paper uses shotgun metagenomics to analyze the gut microbiome in AS patients, finding enriched bacterial epitopes linked to HLA-B27 and effects of TNFi therapy and host genotype on microbiome composition.
DOI 10.1136/annrheumdis-2019-215763