Author

F. Yumoto

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3 Biochemistry· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:structural biology· 3 Research Focus:protein folding & dynamics· 2 Research Focus:protein structure prediction· 2 Assay:cryo-EM· 1 Approach:deep learning· 1 Organism:Drosophila· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

R. G. Sierra· 4 shared T. Senda· 3 shared A. Bhowmick· 2 shared A. M. Wolff· 2 shared A. S. Brewster· 2 shared C. H. Yoon· 2 shared D. Im· 2 shared E. Nango· 2 shared

Activity by Year

2019-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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4 shared papersBiophysics

R. G. Sierra

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Mapping Protein Dynamics at High-Resolution with Temperature-Jump X-ray Crystallography

A. M. Wolff, E. Nango, I. D. Young, A. S. Brewster, M. Kubo, T. Nomura, M. Sugahara, S. Owada, B. A. Barad, K. Ito, A. Bhowmick, S. Carbajo, T. Hino, J. M. Holton, D. Im, , M. C. Thompson

This study uses temperature-jump X-ray crystallography to observe atomic-scale protein motions in lysozyme, showing how vibrations evolve into functional movements and how inhibitors alter these dynamics.

bioRxiv · Jun 10, 2022Biophysics

Structural insight into host plasma membrane association and assembly of HIV-1 Matrix protein

H. Ciftci, H. Tateishi, K. Koiwai, R. Koga, K. Anraku, K. Monde, C. Dag, E. Destan, B. Yuksel, E. Ayan, G. Yildirim, M. Yigin, F. B. Ertem, A. Shafiei, O. Guven, , H. DeMirci

This study presents crystal structures of HIV-1 MA domain bound to IP6, revealing its binding mode and interaction with PIP2, providing insights into virion assembly.

bioRxiv · Feb 21, 2021 · PreprintMicrobiology

An integrated approach unravels a crucial structural property for the function of the insect steroidogenic Halloween protein Noppera-bo

K. Koiwai, K. Inaba, K. Morohashi, S. Enya, R. Arai, H. Kojima, T. Okabe, Y. Fujikawa, H. Inoue, R. Yoshino, T. Hirokawa, K. Kato, K. Fukuzawa, Y. Shimada-Niwa, A. Nakamura, , R. Niwa

This paper determines the structure of the insect steroidogenic Halloween protein Noppera-bo and identifies a conserved residue critical for its function.

bioRxiv · Sep 27, 2019Biochemistry

Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals

A. M. Wolff, I. D. Young, R. G. Sierra, A. S. Brewster, M. W. Martynowycz, E. Nango, M. Sugahara, T. Nakane, K. Ito, A. Aquila, A. Bhowmick, J. T. Biel, S. Carbajo, A. E. Cohen, S. Cortez, , M. C. Thompson

This study compares serial X-ray crystallography and MicroED for determining structures from small macromolecular crystals, highlighting their strengths and challenges.

bioRxiv · Sep 12, 2019Biophysics

Serial femtosecond X-ray diffraction of HIV-1 Gag MA-IP6 microcrystals at ambient temperature

H. I. Ciftci, R. G. Sierra, C. H. Yoon, Z. Su, H. Tateishi, R. Koga, K. Kotaro, F. Yumoto, T. Senda, M. Liang, S. Wakatsuki, M. Otsuka, M. Fujita, H. Demirci

This study uses serial femtosecond X-ray crystallography to analyze HIV-1 Gag MA-IP6 microcrystals at ambient temperature, achieving high-resolution diffraction data.

bioRxiv · Mar 23, 2019Biophysics