Author
B. Liu
First Affiliated Hospital of Xi'an Jiaotong UniversityPrimary ORCID profile (0009-0003-7317-4079 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints
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Biology Disciplines
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2017-2026 · peak 43/yrCo-Author Collaboration Network
10 top collaborators · 28 mutual co-author links169 papers
Recent·Most cited
- ImmunologybioRxivPreprint
Spike-specific CXCR3+ TFH cells play a dominant functional role in supporting antibody responses in SARS-CoV-2 infection and vaccination
J. Zhang, R. He, B. Liu…·X. Qu
This study identifies spike-specific CXCR3+ TFH cells as key drivers of long-term antibody responses in SARS-CoV-2 infection and vaccination.
DOI 10.1101/2022.08.09.503302 - MicrobiologyPLOS PathogensPeer-reviewed
Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike
K. Qu, Q. Chen, K. A. Ciazynska…·J. A. G. Briggs
This study engineers a SARS-CoV-2 spike protein with a disulfide bond to stabilize the locked conformation, revealing structural dynamics and the role of domain D in conformational changes and viral fitness.
DOI 10.1371/journal.ppat.1010583 - BiophysicsbioRxiv
Complex functional phenotypes of NMDA receptor disease variants
G. J. Iacobucci, B. Liu, H. Wen…·G. K. Popescu
This study investigates how specific NMDA receptor variants affect receptor function through molecular dynamics and electrophysiology, revealing that altered interactions at P552 and F652 lead to complex functional deficits.
DOI 10.1038/s41380-022-01774-6 - PathologybioRxiv
Metabolomics and transcriptomics reveal the response mechanisms of Mikania micrantha to Puccinia spegazzinii infection
B. Liu, X. Ren, G. Zhang…·W. Qian
This study investigates how Mikania micrantha responds to Puccinia spegazzinii infection using metabolomics and transcriptomics, identifying changes in metabolites and gene expression.
DOI 10.3390/microorganisms11030678 - BiochemistrybioRxivPreprint
A Modular Chemoenzymatic Approach to C14-Functionalized Steroids
F. Song, M. Zheng, J. Wang…·X. Qu
This paper develops a modular chemoenzymatic method to synthesize diverse C14-functionalized steroids using a novel CYP14A enzyme and its variants.
DOI 10.1101/2022.06.08.495276 - Plant BiologybioRxiv
A remodeled RNA polymerase II complex catalyzing viroid RNA-templated transcription
S. D. Dissanayaka Mudiyanselage, J. Ma, T. Pechan…·Y. Wang
This study identifies a remodeled RNA polymerase II complex that catalyzes viroid RNA-templated transcription, distinct from DNA-template Pol II complexes.
DOI 10.1371/journal.ppat.1010850 - Evolutionary BiologybioRxivPreprint
Fast and Accurate Species Trees from Weighted Internode Distances
This paper introduces weighted ASTRID, a fast species tree estimation method that improves accuracy by incorporating branch uncertainty from gene trees, outperforming the original ASTRID and competing with weighted ASTRAL.
DOI 10.1101/2022.05.24.493312 - Cell BiologybioRxiv
Senescent Preosteoclast Secretome Promotes Metabolic Syndrome Associated Osteoarthritis through Cyclooxygenase 2
M. Wan, W. Su, G. Liu…·S. Demehri
This study identifies a senescent preosteoclast secretome-COX2/PGE2 axis as a driver of metabolic syndrome-associated osteoarthritis, with selective COX2 inhibitors showing therapeutic potential.
- Cell BiologybioRxiv
Actin nano-architecture of phagocytic podosomes
J. C. Herron, S. Hu, T. Watanabe…·K. M. Hahn
The paper uses advanced microscopy techniques to characterize the structure of phagocytic podosomes during frustrated phagocytosis, revealing their unique actin architecture and associated protein distributions.
DOI 10.1038/s41467-022-32038-0 - MicrobiologyFrontiers in MicrobiologyPeer-reviewed
Glycopeptide antibiotic teicoplanin inhibits cell entry of SARS-CoV-2 by suppressing the proteolytic activity of cathepsin L
F. Yu, T. Pan, F. Huang…·X. Ma
This paper shows that teicoplanin inhibits SARS-CoV-2 cell entry by blocking cathepsin L proteolytic activity, effective against multiple variants with IC50 values of 2.038 M and 2.116 M.
DOI 10.3389/fmicb.2022.884034 - MicrobiologybioRxivPreprint
Distinct denitrifying phenotypes of predominant bacteria mould nitrous oxide metabolism in upland agricultural soils
The paper investigates N2O emissions in two agricultural soils by analyzing denitrifying bacterial communities and their metabolic phenotypes, finding that differences in bacterial composition and gene function drive variations in N2O accumulation.
DOI 10.1101/2022.03.08.481735 - ZoologybioRxivPreprint
Individually unique, fixed stripe configurations of Octopus chierchiae allow for photo-identification in long-term studies
B. Liu, L. Song, S. Kelkar…·R. Caldwell
This study shows that Octopus chierchiae has unique, stable stripe patterns that can be used for photo-identification of individuals over time.
DOI 10.1101/2022.03.01.482473 - Evolutionary BiologyMolecular PlantPeer-reviewed
Genome sequences of the five Sitopsis species of Aegilops and the origin of polyploid wheat B-subgenome
L. Li, Z. Zhang, Z. Wang…·B. Liu
This paper reports chromosome-level genome assemblies of five Sitopsis species and identifies the B-subgenome donor of bread wheat as an extinct species closely related to Ae. speltoides.
DOI 10.1016/j.molp.2021.12.019 - ImmunologybioRxivPreprint
A novel intranasal administration adenoviral vector-based platform for rapid COVID-19 vaccine development
Y. Yuan, X. Gao, F. Ni…·M. Liang
This paper develops a chimpanzee adenovirus-based vaccine against the SARS-CoV-2 Delta variant and shows it induces strong immunity and protects mice from challenge.
DOI 10.1101/2022.02.21.481247 - Cell BiologybioRxiv
Live cell biosensors based on the fluorescence lifetime of environment-sensing dyes
B. Mehl, L. Li, E. Hinde…·K. M. Hahn
This study develops a FLIM biosensor using merocyanine dyes to detect conformational changes in Cdc42, showing improved sensitivity at low activation levels compared to FRET-based methods.
DOI 10.1016/j.crmeth.2024.100734 - Plant BiologybioRxivPreprint
Knock-out of CmNAC-NOR affects melon climacteric fruit ripening
B. Liu, M. S. Domingo, C. Mayobre…·J. Garcia-Mas
The paper investigates the role of CmNAC-NOR in melon ripening by analyzing CRISPR/Cas9 mutants, finding that its disruption blocks climacteric ripening and alters fruit characteristics.
DOI 10.1101/2022.02.02.478821 - BiophysicsbioRxiv
Catch bond models may explain how force amplifies TCR signaling and antigen discrimination
H.-K. Choi, P. Cong, C. Ge…·C. Zhu
The paper develops models to explain how force affects TCR signaling and antigen discrimination by analyzing bond characteristics of TCR-pMHC interactions.
DOI 10.1038/s41467-023-38267-1 - Pharmacology & ToxicologybioRxivPreprint
Tissue fibroblasts are a critical source of prostacyclin and anti-thrombotic
J. A. Mitchell, M. Vinokurova, M. E. Lopes-Pires…·N. S. Kirkby
The paper shows lung and other tissues produce prostacyclin via fibroblasts, providing systemic anti-thrombotic protection, challenging the traditional view that endothelium is the main source.
- Plant BiologybioRxiv
Effects of homoeologous exchange on gene expression and alternative splicing in a newly formed allotetraploid wheat
Z. Zhang, H. Xun, R. Lv…·B. Liu
This study investigates how homoeologous exchange affects gene expression and alternative splicing in synthetic allotetraploid wheat, finding cis- and trans-regulatory impacts on gene expression and AS events.
DOI 10.1111/tpj.15886 - Plant BiologyPlant PhysiologyPeer-reviewed
Interfered Chromosome Pairing Promotes Meiosis Instability of Autotetraploid Arabidopsis by High Temperatures
H. Fu, J. Zhao, Z. Ren…·B. Liu
This study shows that increased temperatures disrupt meiotic stability in autotetraploid Arabidopsis by interfering with chromosome pairing and crossing-over.
DOI 10.1093/plphys/kiab563 - Plant BiologybioRxiv
A nuclear import pathway exploited by pathogenic noncoding RNAs
J. Ma, S. D. D. Mudiyanselage, W. J. Park…·Y. Wang
The paper identifies a cellular pathway involving Importin alpha-4 and Virp1 that facilitates nuclear import of noncoding RNAs, including viroids and a subviral satellite RNA.
DOI 10.1093/plcell/koac210 - PhysiologyJournal of the American Heart AssociationPeer-reviewed
Loss of Endothelial HIF-Prolyl hydroxylase 2 (PHD2) Induces Cardiac Hypertrophy and Fibrosis
Z. Dai, J. Cheng, B. Liu…·Y. Zhao
This study shows that loss of endothelial PHD2 causes cardiac hypertrophy and fibrosis via HIF-2, and PHD2 is reduced in human cardiomyopathy.
DOI 10.1161/jaha.121.022077 - Evolutionary BiologybioRxiv
Scalable Species Tree Inference with External Constraints
This paper introduces two new methods for species tree inference under the multi-species coalescent model that use external constraints and are faster than existing methods.
DOI 10.1089/cmb.2021.0543 - Cancer BiologybioRxivPreprint
ERα-LBD, a novel isoform of estrogen receptor alpha, promotes breast cancer proliferation and endocrine resistance
A. Strillacci, P. Sansone, V. R. Rajasekhar…·J. Bromberg
The paper identifies ER-LBD, a novel estrogen receptor alpha isoform, which promotes breast cancer growth and resistance to endocrine therapy.
DOI 10.1101/2021.10.14.464262 - Cell BiologybioRxiv
Extracellular Fluid Flow Induces Shallow Quiescence through Physical and Biochemical Cues
B. Liu, X. Wang, L. Jiang…·G. Yao
This study shows that extracellular fluid flow reduces cellular quiescence depth through physical and biochemical cues, making cells more likely to reenter the cell cycle.
DOI 10.3389/fcell.2022.792719 - Cancer BiologyCancer CellPeer-reviewed
Activating a collaborative innate-adaptive immune response to control breast and ovarian cancer metastasis
L. Sun, T. Kees, A. S. Almeida…·M. EGEBLAD
This study shows that combining MPLA and IFNγ reprograms macrophages to kill cancer cells and reduce metastasis in breast and ovarian cancer models.
- PhysiologybioRxiv
Endothelial PHD2 Deficiency Induces Nitrative Stress via Suppression of Caveolin-1 in Pulmonary Arterial Hypertension
B. Liu, Y. Peng, D. Yi…·Y. Zhao
This study shows that endothelial PHD2 deficiency leads to nitrative stress via suppression of Caveolin-1, contributing to pulmonary arterial hypertension and vascular remodeling.
DOI 10.1183/13993003.02643-2021