Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
8 papers
Recent·Most cited
M. Maiers, Y. Louzoun, P. Pymm, J. P. Vivian, J. Rossjohn, A. G. Brooks, P. M. Saunders
The paper builds a machine learning model to predict KIR3DL1 binding to HLA class I allotypes, showing that binding is influenced by multiple non-additive regions beyond the classical Bw4 motif.
bioRxiv · May 3, 2024Immunology
T. V. Cornforth, N. A. Moyo, S. Cole, E. Lam, T. Lobry, R. Wolchinsky, A. Lloyd, K. Ward, E. M. Denham, G. S. Besra, N. Veerapen, P. T. Illing, J. P. Vivian, J. M. Raynes, J. Le Nours, , J. Dukes
The paper shows that MR1-restricted TCRs recognize an allelic variant of MR1 (MR1*04) present in healthy individuals, indicating that these TCRs are not cancer-specific and may react to both cancer and healthy cells.
bioRxiv · Jul 17, 2023Cancer Biology
M. Koutsakos, A. Reynaldi, W. S. Lee, J. Nguyen, T. Amarasena, G. Taiaroa, P. Kinsella, K. C. Liew, T. Tran, H. E. Kent, H.-X. Tan, L. C. Rowntree, T. H. O. Nguyen, P. Thomas, K. Kedzierska, , J. A. Juno
This study examines T cell responses during SARS-CoV-2 breakthrough infections, showing rapid recall of memory T cells and a correlation between CD8+ T cell activation and viral clearance.
bioRxiv · Dec 19, 2022Immunology
Y. Zhao, B. He, C. Li, Z. Xu, X. Su, J. Rossjohn, J. Song, J. Yao
DeepAIR integrates sequence and 3D structure features of adaptive immune receptors to predict binding affinity and reactivity, outperforming existing methods on multiple tasks.
bioRxiv · Sep 30, 2022Immunology
W. H. Palmer, L. A. Leaton, A. Campos Codo, P. S. Hume, B. Crute, M. Stone, A. van Bokhoven, R. P. Tobin, M. McCarter, W. J. Janssen, J. Roest, S. Zhu, J. Petersen, J. P. Vivian, J. Rossjohn, , P. J. Norman
This study identifies KIR3DL3 expression in T cells, showing it is upregulated by unconventional stimulation and varies by individual genetic variants.
bioRxiv · Aug 17, 2022Immunology
P. A. Mudd, A. A. Minervina, M. V. Pogorelyy, J. S. Turner, W. Kim, E. Kalaidina, J. Petersen, A. J. Schmitz, T. Lei, A. Haile, A. M. Kirk, R. C. Mettelman, J. C. Crawford, T. H. O. Nguyen, L. C. Rowntree, , A. Ellebedy
This study shows that SARS-CoV-2 mRNA vaccination leads to strong and long-lasting T follicular helper cell responses in humans.
bioRxiv · Sep 8, 2021Immunology
S. Suliman, L. Kjer-Nielsen, S. Iwany, K. Lopez, L. Loh, K. Kedzierska, T. A. Ocampo, A. Corbett, J. McCluskey, J. Rossjohn, S. Leon, R. Calderon, L. Lecca, M. B. Murray, B. Moody, I. Van Rhijn
The paper identifies dual TCR-alpha expression on MAIT cells as a confounder in TCR interpretation, showing non-TRAV1-2 TCRs do not bind MR1-5-OP-RU tetramer.
bioRxiv · Mar 25, 2021 · PreprintImmunology
C. F. Almeida, D. Smith, T.-Y. Cheng, C. Harpur, E. Batleska, T. Nguyen, T. Hilmenyuk, C. V. Nguyen-Robertson, S. J. Reddiex, I. Van Rhijn, J. Rossjohn, A. P. Uldrich, B. Moody, S. J. Williams, D. G. Pellicci, D. I. Godfrey
This study identifies benzofuran sulfonates and small self-lipid antigens as activators of type II NKT cells via CD1d, revealing non-lipidic small molecules that trigger CD1d-restricted NKT cell responses.
bioRxiv · Mar 5, 2021Immunology