Author
Z. Zhu
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2017-2023 · peak 23/yrCo-Author Collaboration Network
10 top collaborators · 21 mutual co-author links82 papers
Recent·Most cited
- Cell BiologyNaturePeer-reviewed
Cell transcriptomic atlas of the non-human primate Macaca fascicularis
L. Han, X. Wei, C. Liu…·Z. Liu
The paper presents a single-cell transcriptomic atlas of Macaca fascicularis, identifying cell interactions and disease associations.
DOI 10.1038/s41586-022-04587-3 - Cell BiologybioRxivPreprint
Salicin modifies osteoarthritis progression by binding on IRE1α and inhibiting IRE1α mediated endoplasmic reticulum stress
DOI 10.1101/2022.04.06.487311 - BioengineeringExperimental Eye ResearchPeer-reviewed
Real-time imaging of optic nerve head collagen microstructure and biomechanics using instant polarized light microscopy
P.-Y. Lee, B. Yang, Y. Hua…·I. A. Sigal
This paper demonstrates that instant polarized light microscopy (IPOL) can visualize and quantify collagen morphology and architecture changes in the optic nerve head under dynamic loading.
DOI 10.1016/j.exer.2022.108967 - Cell BiologybioRxivPreprint
Lifting the ban on nuclear import activates Gdown1-mediated modulation of global transcription and facilitates adaptation to cellular stresses
Z. Zhu, J. Liu, H. Feng…·B. Cheng
This study shows that nuclear import of Gdown1 modulates global transcription and enhances cellular stress tolerance.
DOI 10.1101/2022.03.29.486178 - Evolutionary BiologybioRxiv
Three amphioxus reference genomes reveal gene and chromosome evolution of chordates
H. Zhen, L. Xu, C. Cai…·Q. Zhou
This study presents three amphioxus reference genomes, revealing insights into chordate gene and chromosome evolution, including WGDs, chromatin architecture, and sex chromosome dynamics.
DOI 10.1073/pnas.2201504120 - MicrobiologybioRxivPreprint
Nucleocapsid 203 mutations enhance SARS-CoV-2 immune evasion
X. Lin, W. Xue, Y. Zhang…·Z. Zhu
This study shows that the nucleocapsid 203 mutation, combined with spike L452R, enhances SARS-CoV-2 immune evasion and fitness, contributing to the dominance of variants like Delta and Omicron.
DOI 10.1101/2021.12.20.473471 - MicrobiologybioRxiv
Yersinia pseudotuberculosis doxycycline tolerance strategies include modulating expression of genes involved in cell permeability and tRNA modifications
H. S. Alvarez-Manzo, R. K. Davidson, J. Van Cauwelaert de Wyels…·K. M. Davis
This study identifies gene expression changes in Yersinia pseudotuberculosis in response to doxycycline, showing that OmpF porin and TusB tRNA modification influence antibiotic tolerance.
DOI 10.1371/journal.ppat.1010556 - MicrobiologybioRxivPreprint
Fungal Mineral Weathering Mechanisms Revealed Through Direct Molecular Visualization
A. Bhattacharjee, O. Qafoku, J. A. Richardson…·C. R. Anderton
This study visualizes fungal nutrient acquisition and transport through mineral interfaces in a soil micromodel, revealing mechanosensory responses and specific transport mechanisms.
DOI 10.1101/2021.10.01.462718 - MicrobiologybioRxiv
Mutation Y453F in the spike protein of SARS-CoV-2 enhances interaction with the mink ACE2 receptor for host adaption
W. Ren, J. Lan, X. Ju…·Q. Ding
This study identifies the Y453F mutation in SARS-CoV-2 spike protein as enhancing binding to mink ACE2 while maintaining human ACE2 utilization, highlighting its role in host adaptation.
DOI 10.1371/journal.ppat.1010053 - Cancer BiologybioRxivPreprint
Gastric cancer derived exosomes induce peritoneal mesothelial cell EMT through TGF-β1/Smads pathway to promote peritoneal metastasis
J. Dong, Z. Zhu, G. Cui…·X.-P. Liu
This study shows GC-derived exosomes induce EMT in peritoneal mesothelial cells via TGF-β1/Smads pathway, enhancing GC cell migration and adhesion.
DOI 10.1101/2021.07.23.453534 - Cancer BiologybioRxivPreprint
Lung adenocarcinoma cell-derived exosomal miR-328 promote osteoclastogenesis by targeting Nrp2
C. C. Zhang, J. Qin, L. Yang…·Z. Wang
This study shows that exosomal miR-328 from lung adenocarcinoma cells promotes osteoclastogenesis by targeting Nrp2 and suggests its inhibitors as a potential treatment for bone metastasis.
DOI 10.1101/2021.07.08.451611 - Cancer BiologybioRxiv
Leveraging Allele-Specific Expression for Therapeutic Response Gene Discovery in Glioblastoma.
A. Sen, B. C. Prager, D. Park…·G. P. McVicker
This study identifies genes with allele-specific expression in glioblastoma stem cells, finding SLFN11 loss linked to drug resistance and susceptibility to Zika virus.
DOI 10.1158/0008-5472.can-21-0810 - Evolutionary BiologybioRxiv
Nucleocapsid mutation R203K/G204R increases the infectivity, fitness and virulence of SARS-CoV-2
H. Wu, N. Xing, K. Meng…·Z. Zhu
This study shows that the N protein mutations R203K/G204R increase SARS-CoV-2 infectivity, replication, and virulence, contributing to its spread and disease severity.
DOI 10.1016/j.chom.2021.11.005 - ImmunologybioRxivPreprint
Lung Epithelial Cells Can Produce Antibodies Participating In Adaptive Humoral Immune Responses
E. Gao, W. Shao, C. Zhang…·X. Qiu
The paper shows lung epithelial cells can produce TD-Ag-specific antibodies, dependent on CD4+ T cells, challenging the notion that B cells are the sole source of such antibodies.
DOI 10.1101/2021.05.13.443498 - Cell BiologybioRxiv
Pyroptosis of syncytia formed by fusion of SARS-CoV-2 Spike and ACE2 expressing cells
The paper investigates syncytia formation between SARS-CoV-2 infected and ACE2-expressing cells, finding that it leads to pyroptosis via Caspase-9 and GSDME activation, contributing to severe COVID-19 inflammation.
DOI 10.1038/s41421-021-00310-0 - Cancer BiologybioRxiv
DARPP-32 promotes ERBB3-mediated resistance to molecular targeted therapy in EGFR-mutated lung adenocarcinoma
S. K. Alam, Y. Zhang, L. Wang…·L. H. Hoeppner
This study identifies DARPP-32 as a mediator of ERBB3-driven resistance to EGFR TKIs in lung adenocarcinoma, showing its role in promoting oncogenic signaling and tumor progression.
DOI 10.1038/s41388-021-02028-5 - BioengineeringbioRxiv
Interplay between intraocular and intracranial pressure effects on the optic nerve head in vivo
Z. Zhu, S. Waxman, B. Wang…·I. A. Sigal
This study measures how changes in intraocular and intracranial pressure affect the optic nerve head in monkeys using OCT, showing significant interactions between the pressures.
DOI 10.1016/j.exer.2021.108809 - Scientific Communication & EducationExperimental and Therapeutic MedicinePeer-reviewed
Dexmedetomidine attenuates the injury of H9C2 cardiomyocytes under Hypoxia/reoxygenation condition partly through the inhibition of endoplasmic reticulum stress
Z. Zhu, X. Ling, H. Zhou, C. Zhang
This study shows that 1 μM Dexmedetomidine reduces H9C2 cardiomyocyte injury under hypoxia/reoxygenation by partially inhibiting endoplasmic reticulum stress.
DOI 10.3892/etm.2020.9564 - MicrobiologybioRxivPreprint
Topoisomerase 1 inhibition therapy protects against SARS-CoV-2-induced inflammation and death in animal models.
J. S. Y. Ho, B. W.-Y. Mok, L. Campisi…·Jeya
This study shows that Top1 inhibition with Topotecan reduces SARS-CoV-2-induced inflammation and mortality in animal models.
- MicrobiologybioRxiv
Comparative genomics of Exiguobacterium reveals what makes a cosmopolitan bacterium
D.-C. Zhang, Z. Zhu, X. Li…·J. Zheng
This study identifies genetic factors enabling Exiguobacterium's cosmopolitan distribution through comparative genomics and metabolic analysis of 103 strains.
DOI 10.1128/msystems.00383-21 - Cell BiologybioRxiv
Metformin prevented high glucose-induced endothelial reactive oxygen species via OGG1 in an AMPKα-Lin-28 dependent pathway
L. Tao, X. Fan, J. Sun, Z. Zhu
This study shows metformin reduces high glucose-induced endothelial ROS through the AMPKα-Lin-28-OGG1 pathway in HUVECs and diabetic mice.
- Plant BiologybioRxiv
EARLY FLOWERING 3 controls temperature responsiveness of the circadian clock
This study shows ELF3 is essential for temperature entrainment of the circadian clock in Arabidopsis, affecting thermoresponsive physiological processes.
DOI 10.1093/jxb/erab473 - Plant BiologybioRxivPreprint
Activated Expression of Master Regulator MYB31 and of Capsaicinoid Biosynthesis Genes Results in Capsaicinoid Biosynthesis and Accumulation in the Pericarp of the Extremely Pungent Capsicum chinense
B. Sun, J. Wang, W. Cai…·Z. Zhu
The paper shows that MYB31 activation and CBG expression in the pericarp of C. chinense leads to high capsaicinoid accumulation, explaining the extreme pungency of these peppers.
DOI 10.1101/2020.11.05.369454 - BiochemistrybioRxiv
Identification of Lysine Isobutyrylation as A New Histone Modification Mark
Z. Zhu, Z. Han, L. Halabelian…·Y. G. Zheng
The paper identifies lysine isobutyrylation as a new histone modification mark and shows its role in epigenetic regulation and cellular physiology.
DOI 10.1093/nar/gkaa1176 - BiochemistrybioRxiv
Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases
K. Kato, S. Ahmad, Z. Zhu…·s. Hur
The paper reveals conserved interaction rules between RNA helicases and TRIM E3 ligases in vertebrate innate immunity using cryo-EM and biochemistry.
DOI 10.1016/j.molcel.2020.11.047 - Cell BiologybioRxiv
Histone demethylase complexes KDM3A and KDM3B cooperate with OCT4/SOX2 to construct pluripotency gene regulatory network
The paper shows that KDM3A and KDM3B, along with OCT4/SOX2, regulate H3K9 methylation to maintain pluripotency in porcine-induced pluripotent stem cells.
DOI 10.1096/fj.202100230r - Pharmacology & ToxicologybioRxiv
Development of a small molecule that corrects misfolding and increases secretion of Z α1-antitrypsin
D. Lomas, J. A. Irving, C. Arico-Muendel…·A. C. Pearce
This study identifies a small molecule that stabilizes Z α1-antitrypsin, reduces polymerization, and increases its secretion in cells and mice.
DOI 10.15252/emmm.202013167 - BiochemistrybioRxiv
Repurposing low-molecular-weight drugs against the main protease of severe acute respiratory syndrome coronavirus 2
J. Gao, L. Zhang, X. Liu…·K. Ruan
The paper identifies low-molecular-weight drugs that inhibit SARS-CoV-2 main protease using a fragment-based approach, finding niacin and hit 1 bind to the catalytic pocket and leading to the discovery of four drug candidates.
DOI 10.1021/acs.jpclett.0c01894