Author
J. Zhu
Cornell University
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2016-2026 · peak 38/yrCo-Author Collaboration Network
10 top collaborators · 38 mutual co-author links189 papers
Recent·Most cited
- ImmunologybioRxiv
Vaccination with mycobacterial lipid loaded nanoparticle leads to lipid antigen persistence and memory differentiation of antigen-specific T cells
E. Morgun, J. Zhu, S. Almunif…·C.-R. Wang
This study shows that vaccinating with mycobacterial lipid-loaded nanoparticles induces persistent lipid antigen presence and memory T cell differentiation in mice.
DOI 10.7554/elife.87431 - ImmunologybioRxiv
Comprehensive Multi-omics Analysis Reveals the Core Role of Glycerophospholipid Metabolism in Rheumatoid Arthritis Development
C. Jian, L. Wei, T. Wu…·F. Zeng
This study identifies glycerophospholipid metabolism as a key factor in rheumatoid arthritis development through multi-omics analysis of gut microbiota, metabolites, and gene expression.
DOI 10.1186/s13075-023-03208-2 - MicrobiologybioRxiv
Chemically-induced targeted protein degradation in mycobacteria uncovers antibacterial effects and potentiates antibiotic efficacy
H. I. Won, J. Zhu, O. Kandror…·E. J. Rubin
This study uses a genetic system to screen essential proteins in Mycobacterium smegmatis, identifying labile targets for PROTACs and showing their potential to enhance antibiotic efficacy.
DOI 10.1038/s41467-024-48506-8 - ImmunologybioRxivPreprint
Stroke induces early recurrent vascular events by inflammasome-dependent atherosclerotic plaque rupture
J. Cao, S. Roth, S. Zhang…·A. Liesz
This study shows stroke triggers inflammasome-dependent atherosclerotic plaque rupture, leading to recurrent stroke, and identifies DNA-mediated inflammasome activation as a therapeutic target.
DOI 10.1101/2023.02.01.526550 - BiochemistrybioRxivPreprint
Illumination of the complement receptors C3aR and C5aR signaling by anaphylatoxins
Y. Wang, Y. Zhuang, E. H. Xu…·Y. Jiang
This study reports the structures of C3a-bound C3aR and C5a-bound C5aR1, revealing their ligand recognition and activation mechanisms.
DOI 10.1101/2023.01.18.524551 - Cell BiologybioRxiv
Tryptophan depletion sensitizes the AHR pathway by increasing AHR expression and GCN2/LAT1-mediated kynurenine uptake, and potentiates induction of regulatory T lymphocytes
M. Solvay, P. Pfander, S. Klaessens…·J. Zhu
This study shows that tryptophan depletion increases AHR expression and kynurenine uptake, enhancing AHR activation and promoting regulatory T cell differentiation.
DOI 10.1136/jitc-2023-006728 - BiochemistrybioRxivPreprint
The MTORC1-AHR pathway sustains translation and autophagy in tumours under tryptophan stress
P. Holfelder, L. Hensen, M. T. Prentzell…·S. Harder
This study identifies the MTORC1-AHR pathway as a mechanism sustaining translation and autophagy in tumors under tryptophan stress by enhancing AHR activity and autophagy regulators.
DOI 10.1101/2023.01.16.523931 - Cell BiologybioRxiv
FAM76B regulates NF-κB-mediated inflammatory pathway by influencing the translocation of hnRNPA2B1
D. Wang, X. Zheng, L. Chai…·H. Xia
This study shows FAM76B inhibits NF-κB-mediated inflammation by affecting hnRNPA2B1 translocation in vitro and in a TBI mouse model, and identifies its interaction with hnRNPA2B1 in human TBI and neurodegenerative disease tissues.
- MicrobiologybioRxivPreprint
rcsB enhances drug resistance of Klebsiella pneumoniae ATCC43816 by regulating the formation of its capsule
H. Huang, T. Wang, J. Zhu…·H. Du
The paper investigates drug resistance in Klebsiella pneumoniae, finding that rcsB regulates capsule formation, which affects drug resistance.
DOI 10.1101/2022.12.24.521839 - Cell BiologybioRxivPreprint
Restoring glucose homeostasis with stomach-derived human insulin-secreting organoids
X. Huang, W. Gu, J. Zhang…·Q. Zhou
This study generates insulin-secreting organoids from human gastric stem cells that restore glucose homeostasis in diabetic mice.
DOI 10.1101/2022.12.15.520488 - MicrobiologybioRxivPreprint
KDM5A/B promotes HIV-1 latency and KDM5 inhibitors promote HIV-1 lytic reactivation
T.-W. Li, D. Zhou, Z. Wu…·J. Zhu
This study shows that KDM5A/B promote HIV-1 latency and their inhibition with JQKD82, combined with AZD5582, reactivates HIV-1 and induces cell death.
DOI 10.1101/2022.11.17.516956 - MicrobiologybioRxivPreprint
Peptidyl tRNA hydrolase is required for robust prolyl-tRNA turnover in Mycobacterium tuberculosis
F. G. Tomasi, J. T. P. Schweber, S. Kimura…·E. J. Rubin
The paper develops Cu-tRNAseq to study peptidyl tRNA turnover in Mtb, finding Pth is essential for prolyl-tRNA recycling and identifies Pth as a potential TB therapeutic target.
DOI 10.1101/2022.11.15.516451 - BiophysicsNature CommunicationsPeer-reviewed
Small Molecules Targeting the Disordered Transactivation Domain of the Androgen Receptor Induce the Formation of Collapsed Helical States
J. Zhu, X. Salvatella, P. Robustelli
This paper uses molecular dynamics simulations to study how small molecules bind to the disordered AR-NTD, revealing structural mechanisms that explain their potency and provide insights for drug design.
DOI 10.1038/s41467-022-34077-z - ImmunologybioRxiv
Universal chimeric Fcγ receptor T cells with appropriate affinity for IgG1 antibody exhibit optimal antitumor efficacy
This study evaluates the impact of Fcγ receptor affinity on CAR T cell efficacy and safety, finding that moderate affinity provides optimal antitumor activity while high affinity causes toxicity.
DOI 10.1016/j.apsb.2023.02.004 - Plant BiologybioRxivPreprint
Single-cell profiling of complex plant responses to Pseudomonas syringae infection
J. Zhu, S. Lolle, A. Tang…·G. Coaker
The paper profiles single-cell RNA sequencing data from Arabidopsis infected with Pseudomonas syringae to identify immune and susceptible cell clusters and their transcriptional responses.
DOI 10.1101/2022.10.07.511353 - Cell BiologybioRxivPreprint
Long-term passaging of replication competent pseudo-typed SARS-CoV-2 reveals the antiviral breadth of monoclonal and bispecific antibody cocktails
J. Zhu, H. Ma, H. Zong…·Y. Xie
This study evaluates the antiviral breadth of monoclonal and bispecific antibody cocktails against SARS-CoV-2 variants using a replication competent VSV-SARS-CoV-2 model, showing resistance to mutation in two cocktails.
DOI 10.1101/2022.10.05.511057 - Plant BiologybioRxivPreprint
Integrative multispecies omics reveals a hierarchy of cold-responsive regulatory network launched by circadian components in rosids
This study identifies conserved cold-responsive regulators and their regulatory networks across three rosid species, revealing a hierarchical control involving circadian components.
DOI 10.1101/2022.10.03.510673 - BioengineeringbioRxiv
All-Aqueous Printing of Viscoelastic Droplets in Yield-Stress Fluids
This paper identifies key parameters and stages for all-aqueous printing of viscoelastic droplets in yield-stress fluids, providing a framework for precise 3D bioprinting.
DOI 10.1016/j.actbio.2022.09.031 - BiochemistrybioRxiv
Rational optimization of a transcription factor activation domain inhibitor
S. Basu, P. Martinez-Cristobal, M. Pesarrodona…·X. Salvatella
This study optimizes a small molecule inhibitor targeting the aromatic-rich activation domain of the androgen receptor, showing improved affinity and antitumorigenic effects in prostate cancer models.
DOI 10.1038/s41594-023-01159-5 - Cell BiologybioRxivPreprint
Cell surface excess is essential for protrusions and motility in 3D matrix
M. Kapustina, D. Li, J. Zhu…·R. E. Cheney
This study shows that cell surface excess (CSE) is crucial for protrusions and motility in 3D collagen matrices, with microtubules regulating its storage and release.
DOI 10.1101/2022.08.12.503602 - Cell BiologybioRxivPreprint
Retrograde mitochondrial signaling governs the identity and maturity of metabolic tissues
G. L. Pearson, E. M. Walker, N. Lawlor…·S. A. Soleimanpour
This study shows that mitochondrial dysfunction triggers a retrograde signaling program that reduces cellular maturity in metabolic tissues, and blocking this signaling can restore cell identity and improve hyperglycemia.
DOI 10.1101/2022.08.02.502357 - Cancer BiologybioRxiv
YAP antagonizes TEAD-mediated AR signaling and prostate cancer growth
S. Zhuo, X. Li, Y. S. Cho…·J. Jiang
This study shows YAP suppresses AR-driven prostate cancer growth by blocking TEAD-mediated AR signaling through competitive binding.
DOI 10.15252/embj.2022112184 - ImmunologybioRxivPreprint
The porcine cGAS-STING pathway exerts an unusual antiviral function independent of IFN and autophagy
J. Zhu, S. Jiang, N. Xia…·F. Meurens
This study shows porcine STING has antiviral activity independent of IFN and autophagy, and also triggers apoptosis to resist viral infections.
DOI 10.1101/2022.07.28.501948 - ImmunologybioRxiv
Discovery of an AIM2 inflammasome inhibitor for the treatment of DNA-driven inflammatory disease.
J. P. Green, L. Y. El-Sharkawy, S. Roth…·D. Brough
The paper identifies inhibitors of DNA sensors like AIM2, cGAS, and TLR9, including 4-sulfonic calixarenes and suramin, showing potential for treating DNA-driven inflammatory diseases.
DOI 10.1016/j.isci.2023.106758 - ImmunologybioRxivPreprint
Age-related seroprevalence trajectories of seasonal coronaviruses in children
This study examines age-related seroprevalence of four seasonal coronaviruses in children and postpartum women, showing waning passive immunity and resurgence of IgGs with age.
DOI 10.1101/2022.07.26.501649 - Cell BiologybioRxivPreprint
TWISTED DWARF1 mediates myosin XI-associated vesicle trafficking required for auxin transport
J. Liu, J. Zhu, M. di Donato…·M. M. Geisler
This study identifies TWD1 as an ER-actin adapter that links myosin XI-K to auxin transport, explaining defects in ABCB biogenesis and plant development.
DOI 10.1101/2022.07.18.500530 - Plant BiologybioRxivPreprint
ZmEREB57 regulates OPDA synthesis and enhances salt stress tolerance through two distinct signal pathways in Zea mays
This study identifies ZmEREB57 as a maize AP2/ERF transcription factor that enhances salt stress tolerance by regulating OPDA and JA signaling through two distinct pathways.
DOI 10.1101/2022.07.05.498890 - MicrobiologybioRxiv
Single-component multilayered self-assembling protein nanoparticles presenting glycan-trimmed uncleaved prefusion optimized envelope trimers as HIV-1 vaccine candidates
Y.-N. Zhang, J. Paynter, A. Antanasijevic…·J. Zhu
Glycan trimming of HIV-1 Env immunogens improves vaccine-induced neutralizing antibody responses in small animals and primates.