cell signaling & trafficking
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- Cancer BiologybioRxivPreprint
- ImmunologybioRxivPreprint
Circulating CD4 regulatory T cells are broadly preserved in Parkinson's disease despite altered HELIOS expression
Sara C Crooks, Aaditya Prabhu, Lorna B Jarvis…·Joanne L Jones
This study examines circulating CD4 regulatory T cells in Parkinson's disease and finds they are largely preserved in phenotype and function, though show reduced HELIOS expression in naive subsets.
DOI 10.64898/2026.11.06.764595 - NeurosciencebioRxivPreprint
Sensory experience-induced plasticity of somatostatin interneurons occurs through two-pore potassium (K2P) channels
Briana M Bohannon, Nellie L Alonso, Mackenzie G Walker…·Daniel Feldman
The paper investigates experience-dependent plasticity in somatostatin interneurons and identifies two-pore potassium (K2P) channels as a mechanism underlying this plasticity.
DOI 10.64898/2026.11.06.764984 - BioengineeringbioRxivPreprint
Receptor-guided engineering of oncolytic vaccinia creates a synthetic support niche for off-the-shelf NK cell therapy
Reza Rezaei, Zhiyang Gan, Ngomu Akeem Akilimali…·Neil C. Sheppard
This paper develops a framework to engineer oncolytic vaccinia virus to support off-the-shelf NK cells by aligning viral payloads with NK cell manufacturing limitations.
DOI 10.64898/2026.11.06.764990 - Cell BiologybioRxivPreprint
Stathmin-2 regulates microtubule dynamics and axonal resilience in human motor neurons
Kaya J.E. Matson, Cecilia R. Petruconis, Amber Hernandez…·Erika L. F. Holzbaur
This study shows STMN2 regulates microtubule dynamics and axonal resilience in human motor neurons, linking cytoskeletal homeostasis to ALS pathology.
- Synthetic BiologybioRxivPreprint
DIALECT: DNA-Programmable Synthetic Cells Communicate with Mammalian Cells through Synthetic Receptors
Jesse Lentjes, Anna-Maria Makri-Pistikou, Bas W. A. Bogels…·Tom F. A. de Greef
DIALECT enables synthetic cells to communicate with mammalian cells via DNA-programmed ligand release and engineered receptors, achieving specific signaling and logic gate functions.
DOI 10.64898/2026.11.06.764853 - ImmunologybioRxivPreprint
Photomechanical engineering of immunogenic whole-cell vaccines by laser-induced vapor nanobubbles for bladder cancer prophylaxis
Nuria Sabando-Garcia, Ainhoa G. Caelles, Noemi Traba…·Juan C. Fraire
This paper demonstrates a drug-free method using laser-induced vapor nanobubbles to create immunogenic whole-cell vaccines for bladder cancer, showing reduced tumor growth and immune activation.
DOI 10.64898/2026.11.06.764866 - BioengineeringbioRxivPreprint
Tissue-like Viscoelasticity Drives Muscle Stem Cell Expansion Through Mechanical Memory Formation
Haiying Hu, Tae Yoon Kwon, Zichen Gao…·Christopher M Madl
This study shows that tissue-like viscoelastic substrates enhance muscle stem cell expansion by creating mechanical memory through focal adhesion stabilization and Rac-Akt signaling.
DOI 10.64898/2026.11.06.764681 - Developmental BiologybioRxivPreprint
Age-dependent mechanical stress underlies unexpected vestibular differentiation and regeneration patterns
Shahar Inbar Kasirer, Michal Shraga, Tim Dullweber…·David Sprinzak
This study shows that mechanical stress influences age-related changes in vestibular hair cell differentiation and regeneration through Notch signaling.
DOI 10.64898/2026.11.05.764569 - Molecular BiologybioRxivPreprint
Hypoxic Stress Induces LARP1-Driven Stress Granules That Protect mRNAs from Decay to Sustain Mitotic Cell Cycle Progression
Tiffanie Lim, Janani Ramanathan, Hongwei Gao…·Anthony Khong
This study shows hypoxia induces LARP1-driven stress granules that protect mRNAs from decay, sustaining mitotic progression in cancer cells.
DOI 10.64898/2026.11.05.764444 - Molecular BiologybioRxivPreprint
A cohesin acetylation complex that recognises nicked DNA
Celine Bouchoux, Frank Uhlmann
The paper predicts a cohesin acetylation complex in budding yeast that interacts with nicked DNA and confirms its function through experiments.
DOI 10.64898/2026.11.05.764696 - ImmunologybioRxivPreprint
IL4Ra Controls The Medullary Dwell Time Of Mature Thymocytes By Scheduling Their Release From The Thymus
Graham Anderson, Kieran D James, Andrea White…·William E Jenkinson
This study shows that IL4Ra signaling in SP thymocytes prolongs their medullary dwell time, enhancing their maturation and functional capabilities.
DOI 10.64898/2026.11.07.765082 - Cell BiologybioRxivPreprint
Circadian Clock Coordination of the Notch-to-Wnt Signaling Switch Promotes Regenerative Myogenesis
Tali Kiperman, XueKai Xiong, Jemima Pangemanan…·Ke Ma
This study identifies the circadian clock's role in coordinating the Notch-to-Wnt signaling switch to enhance regenerative myogenesis in muscle stem cells.
- ImmunologybioRxivPreprint
TMEM11-Dependent Cristae Architecture Restrains Imiquimod-Induced NLRP3 Inflammasome Activation via Mitochondrial ROS
Sonal Srikanth, Beibei Wu, Matthew Do…·Yousang Gwack
This study shows that TMEM11-dependent cristae architecture limits mtROS production, thereby restraining IMQ-induced NLRP3 inflammasome activation.
DOI 10.64898/2026.11.06.764965 - NeurosciencebioRxivPreprint
Projection-specific filtering of delta-theta input by layer 5 neurons in mouse secondary visual cortex
Hugh Takemoto, Zhiwen Ye, Ede A Rancz
The paper investigates how two types of layer 5 neurons in mouse secondary visual cortex process delta-theta rhythmic input, finding differences in filtering but not in spike timing once firing.
DOI 10.64898/2026.11.06.763938 - PhysiologybioRxivPreprint
Analysis of haemolysis-based injury in immortalised proximal tubule epithelial cells is impaired by haemoglobin interference with bioluminescence assays.
Charlotte Trott, James Bennett, Patricia A Murray…·Bettina Wilm
This study shows that haemoglobin from haemolysed plasma interferes with bioluminescence assays in ciPTECs, but does not severely injure the cells.
DOI 10.64898/2026.11.06.764891 - Cell BiologybioRxivPreprint
Junction-level imaging and modeling of transient leaks in epithelia predicts a dynamic tight junction strand network
Anni Pörsti, Aapo Tervonen, Huy Tran…·Teemu O Ihalainen
The paper uses imaging and modeling to study transient leaks in epithelial tight junctions, finding that dynamic strand breaking and sealing explain leak behavior at the junction level.
- Cell BiologybioRxivPreprint
The yeast Gcn2 protein kinase mediates P-body formation both through its activity with eIF2α and with non-canonical substrates
Viktoras Stonys, Simon Hubbard, Mark Peter Ashe, Chris Grant
This study shows that yeast Gcn2 promotes P-body formation through eIF2α phosphorylation and Smu2-dependent mRNA granule maturation, even when eIF2α phosphorylation is blocked.
DOI 10.64898/2026.11.05.764498 - Molecular BiologybioRxivPreprint
HIF1A-AS2 Regulates Hypoxia-Driven HIF Isoform Switching in Human Endothelial Cells
Anna Barton, Anna Wiech-Walow, Paulina Czechowicz…·Rafal Bartoszewski
This study shows HIF1A-AS2 regulates the switch from HIF-1 to HIF-2 signaling in hypoxia by reducing HIF1A expression and increasing HIF-2 activity in endothelial cells.
DOI 10.64898/2026.11.06.764826 - BioinformaticsbioRxivPreprint
BEHAV3D-Explorer enables natural language-assisted profiling of 3D cellular dynamics
Sam de Blank, Emilio Rios-Jimenez, Alejandra Rubio-Munoz…·Maria Alieva
BEHAV3D-Explorer provides a user-friendly platform for analyzing 3D live-cell imaging data using natural language guidance to select analysis strategies and configure workflows.
DOI 10.64898/2026.11.06.764820 - Plant BiologybioRxivPreprint
Thermosensory pathway makes a U-turn to respond to heat
Luciana Bianchimano, Cha San Koh, Maria Belen De Luca…·Jorge Casal
The paper shows that heat stress reverses the growth-promoting thermomorphogenesis pathway in Arabidopsis by suppressing auxin and PIF4 in cotyledons, revealing an active molecular mechanism.
DOI 10.64898/2026.11.06.764838 - Molecular BiologybioRxivPreprint
A Human Tumor Virus Recruits HSP70 Chaperone to Remodel Its Replisome on DNA
Li Wan, Xiaochen Li, Paul Vittot…·Yuan Chang
This study shows that MCV small T protein recruits HSP70 to facilitate LT helicase remodeling and DNA unwinding, revealing a conserved mechanism for replication complex assembly.
DOI 10.64898/2026.11.05.764654 - BiochemistrybioRxivPreprint
Modular assembly of mitochondrial complex III from a dynamic matrix domain pool
Jorge Jimenez-Niebla, Rhoshan Jha, Christophe Wirth…·Carola Hunte
This study reveals how mitochondrial complex III assembles from preformed matrix domain modules, showing dynamic subunit exchange and the role of specific residues in assembly and disease.
DOI 10.64898/2026.11.05.764608 - BiophysicsbioRxivPreprint
Nanomechanical phenotyping uncovers a non-canonical smooth muscle-like hypercontractility program in lung squamous cell carcinoma myofibroblasts
Annalisa Calo, Alejandro Bernardo, Natalia Diaz Valdivia…·Jordi Alcaraz
The paper identifies a non-canonical smooth muscle-like hypercontractility program in LUSC myCAFs using nanomechanical phenotyping, linking it to tumor mechanics and adverse outcomes.
DOI 10.64898/2026.11.06.764840 - Cancer BiologybioRxivPreprint
EGF and EREG regulate early oncoprotein-mediated tissue transformation in intestinal organoids.
Mario O Caracci, Birga Soetje, Luis Manuel Munoz-Nava…·Philippe I.H. Bastiaens
The paper investigates how EGF and EREG influence early oncogenic transformation in intestinal organoids by altering crypt and villus development.
DOI 10.64898/2026.11.07.764837 - BiochemistrybioRxivPreprint
Mapping the reactive cysteine landscape of the NOD-like receptor pyrin domain-containing 3 protein
Bjoern K Ziehr, Bruno C Amaral, David C Schriemer, Justin A MacDonald
This study identifies reactive cysteine residues in NLRP3 and shows how their oxidation by ROS affects NLRP3 conformation and inflammasome activation.
DOI 10.64898/2026.11.06.764924 - Molecular BiologybioRxivPreprint
Palindrome Presence, Location, and Structural Context Are Predictive of RNA Self-Association
Changhwan Ahn, Haebin Park, Vailankanni L Rodrigues, Gregory L Dignon
The paper identifies three classes of palindromic regions in RNA based on structural context and availability, and evaluates their self-interaction stability using simulations.
DOI 10.64898/2026.11.05.764733 - NeurosciencebioRxivPreprint
A Neurocompliant Ionic Conductive Hydrogel Orchestrates Glial and Vascular Remodeling to Mitigate Traumatic Brain Injury
P. D. Okoro, R. Jaberi, S. Blackburn…·Iman Noshadi
This paper develops a conductive hydrogel that reduces glial and vascular damage in traumatic brain injury models.
DOI 10.64898/2026.10.29.762869 - Evolutionary BiologybioRxivPreprint
Massive inter-animal horizontal gene transfer contributes to stress tolerance in the fungus gnat Bradysia coprophila
Rishabh R. Kapoor, Tarun Kumar, Piyush Nanda…·Cassandra G. Extavour
This study identifies extensive horizontal gene transfer in the fungus gnat Bradysia coprophila, showing these genes contribute to stress tolerance and ecological adaptation.
DOI 10.64898/2026.11.06.764122 - NeurosciencebioRxivPreprint
Neurons entrain and shape an intrinsic arteriole rhythm that distributes blood across the cortical mantle
Jacob Duckworth, Thomas Broggini, Karishma Chhabria…·David Kleinfeld
The paper shows neurons entrain an intrinsic arteriole rhythm, shaping blood distribution and vascular responses through frequency-dependent mechanisms.
DOI 10.64898/2026.11.05.764641