Author
David Klenerman
University of CambridgeORCID 0000-0001-7116-6954Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
Click to filter author papersSignature Assays, Organisms & Methods
Click to filter · or open tagActivity by Year
2019-2026 · peak 12/yrCo-Author Collaboration Network
10 top collaborators · 35 mutual co-author links30 papers
Recent·Most cited
- BiophysicsbioRxivPreprint
Spatially patterned, spectral single-molecule microscopy
Joseph S. Beckwith, Brendan Cullinane, Daniel F. Heraghty…·Steven F. Lee
This paper introduces a new spectral single-molecule microscopy technique using spatially patterned detectors, achieving spectral and positional resolution without complex optical components.
- Neurosciencenpj Parkinson s DiseasePeer-reviewed
Nanoscopic tau aggregates in Parkinson's disease
Florence E. Layburn, Dorothea Böken, Yu Zhang…·David Klenerman
This study uses SiMPull to detect nanoscopic tau aggregates in PD brain regions, finding high-intensity aggregates in some PD cases despite negative IHC results.
DOI 10.1038/s41531-026-01489-3 - NeurosciencebioRxivPreprint
Tau aggregate replication occurs at the pre-synapse of cultured human neurons and increases with application of TNFa
Shekhar Kedia, Emre Fertan, Arkoprovo Paul…·David Klenerman
The paper shows TNFα promotes tau aggregation at pre-synapses in human neurons, forming non-fibrillar aggregates that replicate rapidly.
DOI 10.64898/2026.05.30.728997 - BiophysicsbioRxivPreprint
Constructing a single-objective oblique plane microscope (OPM) for fast, multi-colour, high-resolution volumetric fluorescence imaging
Ziwei Zhang, Wenzhi Hong, Yunzhao Wu…·David Klenerman
This paper provides a protocol for building and characterizing an oblique plane microscope (OPM) to enable fast, multi-color, high-resolution volumetric fluorescence imaging with reduced phototoxicity.
- NeuroscienceCell ReportsPeer-reviewed
Small tau aggregates exhibit disease-specific molecular profiles across tauopathies
Dorothea Böken, Melissa Huang, Yunzhao Wu…·David Klenerman
The paper identifies disease-specific molecular profiles of small tau aggregates across different tauopathies using single-molecule assays.
6 citationstop 1% - NeuroscienceActa NeuropathologicaPeer-reviewed
Early synaptic pathology is associated with small tau aggregates in Alzheimer's disease
Emre Fertan, Shekhar Kedia, George Nolan…·David Klenerman
The paper examines tau aggregates in Alzheimer's disease synaptosomes, finding that small tau aggregates are associated with early synaptic pathology.
3 citationstop 2% - BiophysicsBiophysical JournalPeer-reviewed
Patch deconvolution for Fourier light-field microscopy
Bin Fu, Caroline L. Jones, Daniel F. Heraghty…·Steven F. Lee
This paper introduces patch deconvolution to accelerate 3D cellular imaging in Fourier light-field microscopy, achieving faster reconstruction speeds without compromising quality.
4 citationstop 2% - ImmunologyAdvanced SciencePeer-reviewed
Hyaluronidase unlocks sequestered CEACAM5 and improves CAR T-cell therapy in colorectal cancer
Debasis Banik, Christopher J. Ward, Soura Chakraborty…·David Klenerman
This study shows that hyaluronidase improves CEACAM5 accessibility on colorectal cancer cells, enhancing CAR T-cell therapy effectiveness by reducing glycocalyx thickness and restoring sustained T-cell activation.
- Cell BiologybioRxivPreprint
Protein-protein interactions drive differences in the spatiotemporal dynamics of transcription factors NANOG and SOX2 in naïve pluripotent cells
Gökçe G. Agsu, Yuze Cao, Diyan Jain…·Srinjan Basu
The paper tracks SOX2 and NANOG dynamics in live cells using advanced microscopy and analysis pipelines, revealing differences in their spatiotemporal behavior due to protein-protein interactions.
DOI 10.64898/2025.12.03.691924 - NeurosciencebioRxivPreprint
Rare bioactive tau oligomers from Alzheimer brain support both templated misfolding and fibril formation
Noé Quittot, Dhanush Sivasankaran, Dorothea Böken…·Bradley T. Hyman
The paper identifies rare bioactive tau oligomers in Alzheimer's brain that can induce templated misfolding and fibril formation, distinguishing them from non-bioactive oligomers.
DOI 10.1101/2025.09.24.678227 - NeurosciencebioRxivPreprint
Super-resolution microscopy of nanoscopic alpha-synuclein aggregates in brain samples indicates a subset of cells have disrupted protein homeostasis prior to Lewy body formation in Parkinson's disease
Emre Fertan, John S. H. Danial, Stephen J. Neame…·David Klenerman
The paper uses super-resolution microscopy and SIMOA to analyze alpha-synuclein aggregates in Parkinson's disease brain samples and mouse models, finding larger aggregates in PD samples and differences based on extraction methods.
- NeurosciencebioRxivPreprint
Neurodegeneration emerges at a cellular tipping point between aggregate accumulation and removal.
Matthew W. Cotton, Shriram Venkatesan, Joseph S. Beckwith…·Georg Meisl
The paper identifies a cellular tipping point between aggregate accumulation and removal as a universal feature of neurodegeneration, validated through live-cell assays and super-resolution imaging.
- ImmunologybioRxivPreprint
T-cell signaling relies on partial CD45-exclusion at sub-micron sized cellular contacts
Mateusz Kotowski, Daniel F. Heraghty, Markus Körbel…·Simon J. Davis
The paper shows that T-cell activation is initiated by partial CD45 exclusion at sub-micron contacts, leading to strong activation and cytotoxicity through small signaling changes.
3 citations - BiophysicsbioRxivPreprint
Multiparametric Correlative Topographical and Volumetric Fluorescence Microscopy
Wenzhi Hong, Ziwei Zhang, Ao Li…·Andrew Shevchuk
This paper introduces a combined SICM-OPM system for simultaneous non-contact topographical and volumetric fluorescence imaging in live cells, demonstrating its use in studying cellular remodeling and molecular delivery.
- NeurosciencebioRxivPreprint
Lysosomal stress induces amyloid-β aggregate release and reactive transformation in human astrocytes
Sian Goldsworthy, Emre Fertan, Patricia L. Dyal…·Christy Hung
This study shows human astrocytes generate and release amyloid-β aggregates under lysosomal stress, contributing to extracellular Aβ accumulation in Alzheimer's disease.
DOI 10.1101/2025.05.27.656416 - NeuroscienceScience AdvancesPeer-reviewed
Astrocytic RNA editing regulates the host immune response to alpha-synuclein
Karishma D’Sa, Minee L. Choi, Aaron Z. Wagen…·Mina Ryten
The paper shows that astrocytic RNA editing via ADAR1 modulates immune responses to alpha-synuclein, contributing to neuroinflammation in Parkinson's disease.
16 citationstop 4% - Molecular BiologybioRxivPreprint
Fingerprinting disease-derived protein aggregates reveals unique signature of Motor Neuron Disease
Dezerae Cox, Melanie Burke, Sara Milani…·David Klenerman
This study uses single molecule microscopy to fingerprint TDP-43 aggregates in brain tissue, distinguishing MND donors from controls and different MND cohorts.
1 citation - Cell BiologybioRxivPreprint
Non-catalytic role for MLL2 in controlling chromatin organisation and mobility during priming of pluripotent cells for differentiation
M. Steindel, Oliver Davis, Katrin Neumann…·Srinjan Basu
This study shows MLL2 stabilizes 3D chromatin loops during pluripotent cell differentiation without requiring its enzymatic activity.
- BiophysicsbioRxivPreprint
Redistribution of proteasomes through diffusion and cytoskeleton-dependent mechanisms upon stress induced by protein aggregates
Michael J. Morten, Yu Zhang, Bing Li…·Yu Ye
The paper quantifies proteasome re-organization during proteotoxic stress using single-molecule microscopy and shows cytoskeleton-dependent movement restrictions.
3 citations - NeurosciencebioRxivPreprint
Single-molecule characterisation of soluble beta-amyloid aggregate binding by Aducanumab, Lecanemab, Gantenerumab, and Donanemab
Emre Fertan, Jeff Y. L. Lam, Giulia Albertini…·David Klenerman
The paper uses single-molecule detection and super-resolution imaging to analyze how four monoclonal antibodies bind to beta-amyloid aggregates, finding Lecanemab has superior binding properties.
4 citations - NeurosciencebioRxivPreprint
A human neuronal model of sporadic Alzheimer's disease induced by FBXO2 downregulation shows A β aggregation, tau hyperphosphorylation and functional network impairment
Alicia González Díaz, Andrea Possenti, Gustavo Antonio Urrutia…·Michele Vendruscolo
This study shows that downregulating FBXO2 in human iPSC-derived neurons leads to Alzheimer's disease-like features including Aβ aggregation and tau hyperphosphorylation.
DOI 10.1101/2024.09.01.610673 - NeurosciencebioRxivPreprint
SynPull: a novel method for studying neurodegeneration-related aggregates in synaptosomes using super-resolution microscopy
Shekhar Kedia, Emre Fertan, Yunzhao Wu…·David Klenerman
SynPull combines single-molecule pulldown, super-resolution microscopy, and computational analysis to study protein aggregates in synaptosomes from human and mouse samples, revealing AT8-positive tau as the predominant aggregate in Alzheimer's disease.
- NeurosciencePLoS BiologyPeer-reviewed
Selective suppression of oligodendrocyte-derived amyloid beta rescues neuronal dysfunction in Alzheimer's Disease
Rikesh M. Rajani, Robert A. Ellingford, Mariam Hellmuth…·Marc Aurel Busche
This study shows that oligodendrocytes produce amyloid beta in Alzheimer's Disease and that suppressing this production improves brain pathology and neuronal function.
60 citationstop 1% - NeuroscienceNature CommunicationsPeer-reviewed
Co-aggregation with Apolipoprotein E modulates the function of Amyloid-β in Alzheimer's disease
Zengjie Xia, Emily E. Prescott, Agnieszka N. Urbanek…·Suman De
The paper shows that apoE isoforms modulate Aβ aggregation, clearance, and toxicity in Alzheimer's disease, with implications for therapeutic strategies.
63 citationstop 1% - Molecular BiologyProceedings of the National Academy of SciencesPeer-reviewed
Formation of amyloid loops in brain tissues is controlled by the flexibility of protofibril chains
Alyssa Miller, Jiapeng Wei, Sarah Meehan…·Tuomas P. J. Knowles
The paper investigates the formation of amyloid loops in brain tissues and finds that protofibril flexibility, not hydrogen bonding, enables loop formation and disease-related toxicity.
10 citations - NeuroscienceNature NeurosciencePeer-reviewed
Structural conversion of α-synuclein at the mitochondria induces neuronal toxicity
Minee L. Choi, Alexandre Chappard, Bhanu Singh…·Sonia Gandhi
The paper tracks α-synuclein conformational changes in neurons and shows mitochondrial involvement in oligomerization and toxicity.
258 citationstop 1% - NeuroscienceBrainPeer-reviewed
CSPα reduces aggregates and rescues striatal dopamine release in αsynuclein transgenic mice
Laura Calò, Eric Hidari, Michał Węgrzynowicz…·Maria Grazia Spillantini
This study shows that CSP reduces synuclein aggregates and restores dopamine release in a Parkinson's disease mouse model.
22 citations - NeuroscienceActa Neuropathologica CommunicationsPeer-reviewed
ADSoluble aggregates present in cerebrospinal fluid change in size and mechanism of toxicity during Alzheimer's disease progression
Suman De, Daniel R. Whiten, Francesco Simone Ruggeri…·David Klenerman
The paper examines soluble Aβ aggregates in CSF from AD, MCI, and healthy controls, finding stage-specific differences in aggregate size and toxicity mechanisms.
98 citationstop 2%