Author
Y. Gao
Shandong University
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
Click to filter author papersSignature Assays, Organisms & Methods
Click to filter · or open tagActivity by Year
2017-2026 · peak 49/yrCo-Author Collaboration Network
10 top collaborators · 35 mutual co-author links211 papers
Recent·Most cited
- Cell BiologyNature CommunicationsPeer-reviewed
Cavin1 intrinsically disordered domains are essential for fuzzy electrostatic interactions and caveola formation
V. Tillu, J. Rae, Y. Gao…·B. M. Collins
This study shows that Cavin1's intrinsically disordered domains are essential for caveola formation and trafficking through electrostatic interactions and phase separation.
DOI 10.1038/s41467-021-21035-4 - Cell BiologybioRxivPreprint
Comparison analysis on transcriptomic of different human trophoblast development model
Y. Liu, Y. Guo, Y. Gao…·J. Cui
The paper compares transcriptomic profiles of different human trophoblast development models to identify differentially expressed genes and transcription factors.
DOI 10.1101/2021.02.06.430084 - MicrobiologybioRxivPreprint
Impact of Prior Infection on Protection and Transmission of SARS-CoV-2 in Golden Hamsters
C. Zhang, Z. Guo, N. Li…·C. Zhang
This study shows prior SARS-CoV-2 infection in golden hamsters provides partial protection but not sterilizing immunity, and virus can still be transmitted between infected and naive animals through direct contact.
DOI 10.1101/2021.01.30.428920 - MicrobiologybioRxiv
Different resource allocation in a Bacillus subtilis population displaying bimodal motility
L. W. Hamoen, B. Wang, J. Staal…·S. Syvertsson
This study compares gene expression between motile and non-motile cells in Bacillus subtilis, finding reduced ribosomal gene expression in motile cells, suggesting resource reallocation to motility systems.
DOI 10.1128/jb.00037-21 - Evolutionary BiologybioRxiv
Evolution of irreversible somatic differentiation
Y. Gao, H. J. Park, A. Traulsen, Y. Pichugin
This study develops an evolutionary model showing that costly cell differentiation, beneficial vegetative cells, and sufficient organism size are necessary for irreversible somatic differentiation.
DOI 10.7554/elife.66711 - Cell BiologybioRxiv
Muscle-specific Cavin4 interacts with Bin1 to promote T-tubule formation and stability in developing skeletal muscle
H. Lo, Y.-W. Lim, Z. Xiong…·R. Parton
This study identifies Cavin4's role in T-tubule formation and stability in skeletal muscle by showing its interaction with Bin1 and effects on caveolae remodeling.
- ImmunologybioRxiv
Ubiquitination and degradation of NF90 by Tim-3 inhibits antiviral innate immunity
G. Han, S. Dou, G. Li…·J. Zhang
This study shows Tim-3 promotes NF90 ubiquitination and degradation, inhibiting antiviral innate immunity via stress granule formation.
DOI 10.7554/elife.66501 - Cell BiologybioRxiv
Nuclear m6A reader Ythdc1 regulates the scaffold function of LINE1 in mouse ESCs
C. Chen, W. Liu, J. Guo…·S. Gao
This study shows Ythdc1, an m6A reader, regulates LINE1 scaffold function in mouse ESCs, affecting self-renewal and differentiation through chromatin interactions.
DOI 10.1007/s13238-021-00837-8 - MicrobiologybioRxivPreprint
Elucidating the CodY regulon in Staphylococcus aureus USA300 substrains
Y. Gao, S. Poudel, Y. Seif…·B. O. Palsson
This study identifies the CodY regulon in two closely related S. aureus USA300 strains, revealing conserved and strain-specific regulatory patterns and metabolic roles of CodY.
- BiochemistrybioRxiv
Priming mycobacterial ESX-secreted protein B to form a channel-like structure
A. Gijsbers, V. Vinciauskaite, A. Siroy…·R. R. Ravelli
The paper investigates the oligomerization and structural properties of EspB, an ESX-1 substrate, revealing its role in forming a channel-like structure for ESX-1 secretion.
DOI 10.1016/j.crstbi.2021.06.001 - Cell BiologybioRxiv
ADP-ribosylation of mitochondrial proteins is mediated by Neuralized-like protein 4 (NEURL4)
M. D. Cardamone, Y. Gao, J. Kwan…·V. Perissi
This study identifies NEURL4 as the main mitochondrial ADP-ribosyltransferase and shows it regulates mtDNA integrity through poly-ADP-ribosylation of mtLIG3.
DOI 10.1083/jcb.202101021 - MicrobiologybioRxiv
Balancing the influenza neuraminidase and hemagglutinin responses by exchanging the vaccine virus backbone
J. Gao, H. Wan, X. Li…·R. Daniels
The paper shows that exchanging viral backbone genes can increase neuraminidase content in influenza virions, leading to better NA antibody responses in mice.
DOI 10.1371/journal.ppat.1009171 - ImmunologybioRxivPreprint
Recombinant Fc-fusion vaccine of RBD induced protection against SARS-CoV-2 in non-human primate and mice
Y. Sun, G. Han, W. Wei…·Y. Zhao
This study develops and tests a recombinant RBD-Fc vaccine against SARS-CoV-2, showing protection in non-human primates and mice.
DOI 10.1101/2020.11.29.402339 - EcologybioRxiv
Impacts of environmental factors on seed germination and seedling emergence of white clover (Trifolium repens L.)
This study investigates how environmental factors like light, temperature, depth, drought, and salt stress affect white clover seed germination and emergence, finding optimal conditions for successful establishment.
DOI 10.3390/agronomy12010190 - Plant BiologybioRxivPreprint
Genome-wide screen of genomic imprinting in endosperm and population-level analysis reveal allelic variation for imprinting in flax
H. Jiang, D. Guo, J. Ye…·L. Xie
The paper identifies imprinted genes in flax endosperm and shows their role in intraspecific variation and domestication.
DOI 10.1101/2020.11.20.390799 - ImmunologybioRxiv
CXCL10+ peripheral activation niches couple preferred sites of Th1 entry with optimal APC encounter
H. Prizant, N. Patil, S. Negatu…·D. J. Fowell
The paper identifies CXCL10+ perivascular clusters as Th1 activation niches that enhance T cell-APC interactions through IFN-gamma-dependent feedback.
- Plant BiologybioRxivPreprint
Purification, characterization and influence on membrane properties of the plant-specific sphingolipids GIPC
A. Mamode Cassim, Y. Navon, Y. Gao…·S. Mongrand
This study characterizes plant-specific GIPC sphingolipids, showing they increase membrane thickness, electronegativity, and regulate phase transitions.
DOI 10.1101/2020.10.01.313304 - Animal Behavior & CognitionbioRxivPreprint
Abnormal energy metabolism can alter foraging behavior in termites in different social contexts
H. Xu, Q. Huang, Y. Gao…·Y. Liu
This study shows that altering energy metabolism via IDH gene knockdown affects foraging behavior in termites, with social context modulating these effects.
DOI 10.1101/2020.08.20.258848 - Cancer BiologybioRxiv
Mutant-selective Degradation by BRAF-targeting PROTACs
S. Alabi, S. Jaime-Figueroa, Z. Yao…·C. M. Crews
This study develops BRAF-targeting PROTACs that degrade all BRAF mutants at sub-nanomolar concentrations while sparing wild-type RAF family members, showing in vivo efficacy and mechanistic insights.
DOI 10.1038/s41467-021-21159-7 - MicrobiologybioRxiv
There is no evidence of a universal genetic boundary among microbial species
The paper analyzes ANI values across microbial genomes and argues that the observed bimodal distribution does not support a universal genetic boundary due to sampling biases and inflated benchmarks.
DOI 10.1038/s41467-021-24128-2 - MicrobiologybioRxivPreprint
Competition for electrons favors N2O reduction in denitrifying Bradyrhizobium isolates
Y. Gao, D. Mania, S. A. Mousavi…·A. Frostegard
The paper investigates denitrification in Bradyrhizobium isolates, finding that only ~1/3 can reduce N2O, with proteomics showing Nos outcompetes Nap for electrons.
DOI 10.1101/2020.07.20.212696 - BiochemistrybioRxivPreprint
Oxidations and amino acid substitutions in urinary proteins are the distinguishing characteristics of aging
Y. Liu, X. Pan, Y. Hua…·Y. Gao
This study identifies multi-site oxidations and amino acid substitutions in urinary proteins as age-related features by comparing three age groups using mass spectrometry and statistical analysis.
DOI 10.1101/2020.07.13.199984 - Plant BiologybioRxivPreprint
Unravel the Mystery of NIC1-locus on Nicotine Biosynthesis Regulation in Tobacco
X. Sui, H. Xie, Z. Tong…·B. Wang
This paper identifies and characterizes the NIC1-locus in tobacco, showing it regulates nicotine biosynthesis through ERF genes that function downstream of NtMYC2 in the JA signaling pathway.
DOI 10.1101/2020.07.04.187922 - BioengineeringbioRxiv
Efficient precise in vivo base editing in adult dystrophic mice
L. Xu, C. Zhang, H. Li…·R. Han
This paper improves an adenine base editor for in vivo use, achieving efficient dystrophin restoration in dystrophic mice with minimal off-target effects.
DOI 10.1038/s41467-021-23996-y - BiochemistrybioRxiv
Mass-spectrometry-based near complete draft of the Saccharomyces cerevisiae proteome
Y. Gao, L. Ping, D. Duong…·P. Xu
The paper presents a near-complete yeast proteome dataset using optimized sample preparation and high-resolution mass spectrometry, identifying 5610 proteins with 94.1% coverage of yeast ORFs.
DOI 10.1021/acs.jproteome.0c00721 - BiochemistrybioRxivPreprint
Lipidomic profiling of plasma extracellular vesicles as an effective means to evaluate the risk of preterm birth
Q. Zhao, Z. Ma, X. Wang…·Y. Ren
This study identifies lipid differences in plasma, microvesicles, and exosomes between preterm and full-term pregnancies, finding microvesicle lipids better predict preterm birth risk.
DOI 10.1101/2020.06.07.135764