Author
A. Brown
Arizona State University
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2018-2025 · peak 16/yrCo-Author Collaboration Network
10 top collaborators · 22 mutual co-author links52 papers
Recent·Most cited
Arf GTPase activates the WAVE Regulatory Complex through a novel binding site
S. Yang, Y. Liu, A. Brown, M. Schaks, B. Ding, D. A. Kramer, L. Ding, O. Alekhina, D. D. Billadeau, S. Chowdhury, J. Wang, K. Rottner, B. Chen
This study identifies a novel Arf1 binding site on WRC that drives activation through a mechanism distinct from Rac1.
bioRxiv · May 13, 2022 · PreprintBiochemistry
Structures reveal a key mechanism of WAVE Regulatory Complex activation by Rac1 GTPase
B. Ding, S. Yang, M. Schaks, Y. Liu, A. Brown, K. Rottner, S. Chowdhury, B. Chen
The paper reports WAVE Regulatory Complex structures bound to Rac1, revealing how Rac1 binding at the A site activates WRC to drive actin polymerization.
bioRxiv · May 10, 2022Biochemistry
Phylogeny and Metadata Network Database for Epidemiologic Surveillance
G. L. Stott, L. Lyu, G. Veytsel, J. Kuo, R. Lewis, A. Brown, K. Fujimoto, J. Bahl
The paper creates a graph database to integrate SARS-CoV-2 phylogenetic trees, metadata, and surveillance data for phylodynamic analysis.
bioRxiv · Apr 19, 2022 · PreprintEvolutionary Biology
Breadth of SARS-CoV-2 Neutralization and Protection Induced by a Nanoparticle Vaccine
D. Li, D. R. Martinez, A. Schäfer, H. Chen, M. Barr, L. L. Sutherland, E. Lee, R. Parks, D. Mielke, W. Edwards, A. Newman, K. W. Bock, M. Minai, B. M. Nagata, M. Gagne, , B. F. Haynes
This study shows a nanoparticle vaccine induces broad neutralizing antibodies against multiple SARS-CoV-2 variants and protects non-human primates and mice from viral challenges.
bioRxiv · Jan 26, 2022Immunology
Extensive sequence divergence of non-coding regions between Aspergillus fumigatus, a major fungal pathogen of humans, and its relatives
A. Brown, M. E. Mead, J. L. Steenwyk, G. Goldman, A. Rokas
The paper identifies extensive non-coding sequence divergence in A. fumigatus compared to related species, highlighting its potential role in virulence.
bioRxiv · Oct 26, 2021 · PreprintEvolutionary Biology
A Developmentally Prometastatic Niche to Hepatoblastoma in Neonatal Liver mediated by the Cxcl1/Cxcr2 Axis
L. Fan, Q. Pan, W. Yang, S. C. Koo, C. Tian, L. Li, M. Lu, A. Brown, B. Ju, J. Easton, S. Ranganathan, S. Shin, A. Bondoc, J. J. Yang, J. Yu, L. Zhu
This study identifies a neonatal liver niche that promotes hepatoblastoma metastasis via the Cxcl1/Cxcr2 axis, showing increased tumor aggressiveness and hypoxia in early postnatal models.
bioRxiv · Oct 22, 2021Cancer Biology
Heterogeneity in the transcriptional response of the human pathogen Aspergillus fumigatus to the antifungal agent caspofungin
A. C. Colabardini, F. Wang, Z. Dong, L. Pardeshi, M. C. Rocha, J. H. Costa, T. F. dos Reis, A. Brown, Q. Z. Jaber, M. Fridman, T. Fill, A. Rokas, I. Malavazi, K. H. Wong, G. H. Goldman
This study investigates transcriptional heterogeneity in Aspergillus fumigatus strains responding to caspofungin, identifying a core response and variable response linked to secondary metabolite biosynthesis and iron homeostasis.
bioRxiv · Jul 15, 2021Microbiology
Endoplasmic Reticulum morphological regulation by RTN4/NOGO modulates neuronal regeneration by slowing luminal transport
T. Konno, P. Parutto, D. M. D. Bailey, V. Davi, C. Crapart, M. A. Awadelkareem, C. Hockings, A. Brown, K. M. Xiang, A. Agrawal, J. E. Chambers, M. V. Werp, K. Koning, E. Metzakopian, L. Westrate, , E. Avezov
The paper shows RTN4/NOGO regulates ER morphology, which modulates luminal transport and Ca2+ delivery, affecting axonogenesis in neurons.
bioRxiv · May 10, 2021Cell Biology
Paradoxical Roles of Peritumoral Myofibroblasts in Intrahepatic Cholangiocarcinoma Growth and Metastasis
L. Zhu, C. Tian, L. Li, Q. Pan, y. li, W. Yang, L. Fan, A. Brown, M. Morrison, K. M. Dey, E. J. Norris, J. J. Yang, J. Yu, E. S. Glazer
This study shows peritumoral myofibroblasts suppress iCCA growth but promote metastasis through Vcam1-dependent mechanisms.
bioRxiv · Feb 19, 2021 · PreprintCancer Biology
Regulation of neurofilament length and transport by a dynamic cycle of polymer severing and annealing
The paper tracks neurofilament movement in axons, showing that length regulation via severing and annealing affects transport, with phosphorylation modulating these processes.
bioRxiv · Jan 17, 2021 · PreprintCell Biology
Mechanistic understanding enables the rational design of salicylanilide combination therapies for Gram-negative infections
J. Copp, D. Pletzer, A. Brown, J. van der Heijden, C. M. Miton, R. J. Edgar, M. Rich, R. Little, E. Williams, R. E. W. Hancock, N. Tokuriki, D. F. Ackerley
This paper identifies mechanisms of niclosamide action and resistance in Gram-negative bacteria and demonstrates synergistic combination therapies with efflux inhibitors and membrane permeabilizers.
mBio · Oct 27, 2020Peer-reviewedMicrobiology
Chromosome painting in cultivated banana and their wild relatives (Musa spp.) reveals differences in chromosome structure
D. Simonikova, A. Nemeckova, J. Cizkova, A. Brown, R. Swennen, J. Dolezel, E. Hribova
The paper uses FISH with chromosome-arm specific oligo painting probes to analyze chromosome structure differences in banana species and cultivars, revealing translocations and aiding in understanding their genomic evolution.
bioRxiv · Aug 1, 2020Plant Biology
Purification of recombinant SARS-CoV-2 spike, its receptor binding domain, and CR3022 mAb for serological assay
K. L. Tee, P. J. Jackson, J. M. Scarrott, S. R. Jaffe, A. O. Johnson, Y. Johari, T. H. Pohle, T. Mozzanino, J. Price, J. Grinham, A. Brown, M. J. Nicklin, D. C. James, M. J. Dickman, T. S. Wong
The paper describes methods for purifying SARS-CoV-2 spike protein, its receptor binding domain, and CR3022 mAb, and validates their use in serological assays.
bioRxiv · Jul 31, 2020 · PreprintBiochemistry
Disentangling interactions among mercury, immunity, and infection in a Neotropical bat community
D. Becker, K. Speer, J. Korstian, D. Volokhov, H. Droke, A. Brown, C. Baijnauth, T. Padgett-Stewart, H. Broders, R. Plowright, T. Rainwater, M. B. Fenton, N. Simmons, M. Chumchal
The paper examines how mercury contamination interacts with immunity and infection in Neotropical bats, finding that higher mercury levels are linked to lower infection odds in some species but not others.
bioRxiv · Jun 12, 2020 · PreprintEcology
Pex11 β knockdown decreases peroxisome abundance and reverses the inhibitory effect of palmitate on pancreatic beta-cell function.
M. Walker, H. Blair, A. Brown, S. Miwa, A. Heath, A. Russell, M. van Ginkel, D. Gunn, C. Tomas
This study shows that reducing Pex11β decreases peroxisomes and reverses palmitate's negative impact on beta-cell function.
bioRxiv · Apr 3, 2020 · PreprintCell Biology
Non-canonical open reading frames encode functional proteins essential for cancer cell survival
J. R. Prensner, O. M. Enache, V. Luria, K. Krug, K. R. Clauser, J. M. Dempster, A. Karger, L. Wang, K. Stumbraite, V. M. Wang, G. Botta, N. J. Lyons, A. Goodale, Z. Kalani, B. Fritchman, , T. R. Golub
The paper identifies non-canonical open reading frames (ORFs) that encode functional proteins essential for cancer cell survival, with one example, GREP1, showing preferential essentiality in breast cancer.
bioRxiv · Mar 10, 2020 · PreprintCancer Biology
Structure and activation mechanism of the BBSome membrane-protein trafficking complex
A. Brown, S. K. Singh, M. Gui, F. Koh, M. C. Yip
The paper reports cryo-EM structures of the BBSome in inactive and active states, revealing how ARL6 binding activates the complex and how disease mutations disrupt its function.
eLife · Jan 15, 2020Peer-reviewedBiophysics
Ecological and evolutionary drivers of hemoplasma infection and bacterial genotype sharing in a Neotropical bat community
D. Becker, K. Speer, A. Brown, M. B. Fenton, A. Washburne, S. Altizer, D. Streicker, R. Plowright, V. Chizhikov, N. B. Simmons, D. Volokhov
The paper examines hemoplasma infection prevalence and genetic diversity in Neotropical bats, finding high host specificity and phylogenetic constraints on bacterial sharing.
bioRxiv · Dec 21, 2019Ecology
Targeted metagenomic sequencing enhances the identification of pathogens associated with acute infection.
C. Goh, T. Golubchik, M. A. Ansari, M. de Cesare, A. Trebes, I. Elliott, D. Bonsall, P. Piazza, A. Brown, H. Slawinski, N. Martin, S. Defres, M. J. Griffiths, J. E. Bray, M. C. Maiden, , R. Bowden
Castanet, a targeted metagenomic sequencing method, improves pathogen detection in clinical samples by combining sensitivity with cost-effectiveness and broad organism coverage.
bioRxiv · Jul 28, 2019 · PreprintMicrobiology
Applying Inter-rater Reliability to Improve Consistency in Classifying PhD Career Outcomes
C. A. Stayart, P. Brandt, A. Brown, T. Hutto, R. Layton, K. A. Petrie, E. N. Flores-Kim, C. G. Pena, C. N. Fuhrmann, G. C. Monsalve
This study improves the reliability of PhD career outcome classification by revising a taxonomy and guidance document based on inter-rater reliability testing.
bioRxiv · Jul 19, 2018Scientific Communication & Education
Influential parameters for the analysis of intracellular parasite metabolomics
M. A. Carey, V. Covelli, A. Brown, G. L. Medlock, M. Haaren, J. G. Cooper, J. A. Papin, J. L. Guler
This study identifies normalization parameters that significantly affect differential abundance analysis in metabolomics of intracellular parasites, highlighting the impact of host contamination.
bioRxiv · Feb 22, 2018Microbiology