Topic · Virology · Immunology and Microbiology
HIV Research and Treatment
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
338 papers
- ImmunologybioRxivPreprint
Durable suppression of viremia by lipid nanoparticle-formulated RNA encoding for a highly potent HIV-1 neutralizing antibody
Sophie Sayettat, Felix Tolksdorf, Robin Johannson…·Henning Gruell
This study demonstrates that lipid nanoparticle-formulated RNA encoding a potent HIV-1 neutralizing antibody can durably suppress viremia in humanized mice.
DOI 10.64898/2026.09.17.752120 - MicrobiologybioRxivPreprint
Peptide inhibitors recognize prefusion viral fusion proteins with heterogeneous stoichiometry and rapid kinetics
Revansiddha H. Katte, Junyu Liu, Yufan He…·Maolin Lu
This study uses single-molecule imaging to show peptide inhibitors bind to prefusion viral fusion proteins with varying stoichiometry and rapid kinetics, challenging the canonical prehairpin-intermediate model.
DOI 10.64898/2026.09.14.750718 - ImmunologybioRxivPreprint
An eicosanoid-enriched follicular microenvironment shapes germinal centre immune dynamics in antiretroviral-treated PLWH
Spiros Georgakis, Helen Lindsay, Michail Orfanakis…·Constantinos Petrovas
The paper identifies eicosanoid-enriched follicular microenvironments in HIV-infected individuals on antiretroviral therapy that may influence antibody responses and viral reservoir persistence.
DOI 10.64898/2026.09.09.750310 - ImmunologybioRxivPreprint
Plasma Proteomic Profiling Identifies a Subset of HIV Elite Controllers with Inflammatory Profiles Resembling People Without HIV
Shane D. Falcinelli, David P. Maison, Isaac Avila-Vargas…·Michael J. Peluso
The paper identifies a subset of HIV elite controllers with proteomic profiles similar to uninfected individuals, associated with lower viral reservoirs and protective HLA alleles.
DOI 10.64898/2026.09.06.749753 - BiophysicsbioRxivPreprint
Inhibitors of HIV-1 maturation modulate conformational dynamics and heterogeneity of the immature Gag lattice
Tathagata Nandi, Matthew Wong, Abdul A. Waheed…·James B. Munro
This study uses single-molecule imaging to show that maturation inhibitors alter Gag conformational dynamics and spatial heterogeneity in immature HIV-1 virions.
DOI 10.64898/2026.09.11.751012 - NeurosciencebioRxivPreprint✦ In-depth digest
SPP1+ Microglia Are Associated with Neuroimmune Rewiring and Glutamatergic Neuronal Injury in ART-Suppressed People Living with HIV
Ciniso Sylvester Shabangu, Hongjie Chen, Manickam Ashokkumar…·Guochun Jiang
In ART-suppressed human brain, an SPP1+ activated microglial subset holds most detected HIV RNA and shows chronic interferon-I and MHC-I signatures, alongside complement signaling and neuronal loss.
- MicrobiologybioRxivPreprint
CypA is a molecular barrier to HIV emergence from Eastern chimpanzees
Michael J. Young, Fabricio Cotera, Clare C. C. Gill…·Molly OhAinle
The paper identifies CypA as a molecular barrier preventing lentivirus from Eastern chimpanzees from infecting humans, due to its restriction of replication through a unique capsid feature.
DOI 10.64898/2026.09.08.747897 - BiophysicsbioRxivPreprint
Mechanistic Insights into HIV-1 Capsid Interactions with CPSF6
Arpa Hudait, Kuntal Ghosh, Gregory A. Voth
This study uses coarse-grained models to simulate CPSF6 binding and oligomerization on HIV-1 capsid, revealing curvature-dependent interactions and their role in nuclear entry.
DOI 10.64898/2026.09.05.749640 - Evolutionary BiologybioRxivPreprint
A stepwise model for asp gene emergence across HIV and SIV lineages: progressive stop-codon loss and regulatory evolution
DOI 10.64898/2026.09.03.749113 - MicrobiologybioRxivPreprint
MxB N-Terminus Adopts a Stable α-Helix to Engage the HIV-1 Capsid Trimer Interface
Yanan Zhu, Juan S. Rey, Juan Shen…·Peijun Zhang
The paper determines the structure of HIV-1 capsid lattice bound to MxB N-terminal fragment, revealing an alpha-helix stabilizes binding at the trimer interface.
- ImmunologybioRxivPreprint
Modeling how memory CD8 T cells can elicit post-treatment control of HIV infection
Bharadwaj Vemparala, Caroline Passaes, Delphine Desjardins…·Jérémie Guedj
This paper models how memory CD8 T cells can drive post-treatment control of HIV by analyzing SIV-infected non-human primate data and developing a mathematical framework.
DOI 10.64898/2026.09.01.748582 - ImmunologybioRxivPreprint
Screening of epigenetic modifiers identifies novel host-directed agents that suppress HIV-1 replication in primary human macrophages
Gabrielle Lê-Bury, Christine Mandalasi, Jordan M. Rhen…·David G. Russell
This study identifies novel compounds that inhibit HIV-1 replication in primary human macrophages by targeting epigenetic regulators.
DOI 10.64898/2026.09.01.748500 - MicrobiologybioRxivPreprint
Nucleus remodeling activity is conserved amongst diverse SIV Vpr isolates
Zaddock Williford, Emily Leavitt, Nicholas Saladino…·Daniel J. Salamango
The paper shows that 13 out of 16 SIV Vpr isolates activate DDR signaling and nuclear remodeling, with distinct amino acids involved across phylogenetic groups.
DOI 10.64898/2026.09.02.749000 - Systems BiologybioRxivPreprint
High-dimensional HIV-1 quasispecies modeling guides escape-proof antibody design
Griffin Kutler Dodd, Paulien Hogeweg, Rob J. de Boer
This paper develops a high-dimensional HIV-1 quasispecies model to predict viral rebound and guide antibody design without fitting to experimental data.
DOI 10.64898/2026.09.02.748882 - ImmunologybioRxivPreprint
Chronic opioid-associated immune dysregulation among people living with HIV
Brent Bever, Michelle L. Underwood, Byung Park…·Christina Lancioni
This study finds that opioid use disorder is linked to persistent immune dysregulation in HIV-positive individuals despite effective antiretroviral therapy.
DOI 10.64898/2026.08.31.748399 - BioinformaticsbioRxivPreprint
Spatial Transcriptomics Reveals Compartment-Specific Immune Activation Signatures in Ileal and Lymph Node Tissue in Treated HIV Infection
Maura Barrett, Jodi L. Anderson, Kevin Escandón-Vargas…·Christopher M. Basting
This study uses spatial transcriptomics to identify compartment-specific immune activation signatures in ileal and lymph node tissues of HIV-treated patients, revealing tissue-specific transcriptional differences linked to immune activation and microbial translocation.
DOI 10.64898/2026.08.28.747869 - BiophysicsbioRxivPreprint
The interaction between NC(p7)1-55 and p6 may regulate interactions with nucleic acids during assembly through modulation of Gag folding.
Valéry Larue, Sylvie Nonin‐Lecomte
This paper determines the structure of HIV-1 NC(p7)1-55 and shows its interaction with p6, revealing how this interaction may regulate nucleic acid binding during viral assembly.
DOI 10.64898/2026.08.28.747767 - ImmunologybioRxivPreprint
A mechanistic basis for CD8+ T cell expansion sensitivity as a predictor of HIV post-treatment control
Tin Phan, Nicole Pagane, Jasmine A. F. Kreig…·Alan S. Perelson
The paper develops a mechanistic model linking CD8+ T cell expansion sensitivity to HIV post-treatment control, showing strong correlations with Ki-67 and TCF-1 levels.
DOI 10.64898/2026.08.28.747758 - MicrobiologybioRxivPreprint
Expression of the C-type lectin receptor CD205 on B cells mediates HIV-1 binding and trans infection of CD4+ T cells
Abigail D. Gerberick, Allison E. DePuyt, Peter E. J. Shoucair…·Charles Rinaldo
This study identifies CD205 as a B cell receptor that facilitates HIV-1 binding and transfer to CD4+ T cells through CD40L/IL-4 stimulation.
DOI 10.64898/2026.08.28.747757 - ImmunologybioRxivPreprint
Larger inducible reservoir and higher abundance of exhausted CD8+ T cells in people treated after late versus non-late diagnosis of chronic HIV one year after ART initiation
Kathryn S. Hensley, Liset de Vries, Tanvir Hossain…·Tokameh Mahmoudi
DOI 10.64898/2026.03.31.715509 - MicrobiologybioRxivPreprint
Allosteric capsid inhibitors and their escape mutants drive HIV-1 sensing
Kate L. Morling, Morten L. Govasli, Ben Graham…·Greg J. Towers
This study investigates allosteric capsid inhibitors and their resistance mutants, showing they trigger innate immune responses and may reduce HIV-1 transmission.
DOI 10.64898/2026.08.21.746246 - MicrobiologybioRxivPreprint
Ultrasensitive single-genome sequencing reveals strong purifying selection in acute HIV-1 infection
Adam A. Capoferri, Valerie F. Boltz, Wei Shao…·Mary F. Kearney
This study uses ultra-deep single-genome sequencing to show strong purifying selection in early HIV-1 infection, with limited early genetic divergence from founder viruses.
DOI 10.64898/2026.08.21.746200 - ImmunologybioRxivPreprint
REV-ERBα/β Targeting Transcriptionally Reprograms HIV-Infected CD4+ T-Cells for Increased Viral Reactivation but Limited Virion Spread
Christ Dominique Ngassaki Yoka, Jean-Philippe Goulet, Soumia Khalfi…·Petronela Ancuța
This study shows that inhibiting REV-ERBβ increases HIV-1 reactivation in CD4+ T-cells but limits virion spread.
DOI 10.64898/2026.08.20.746039 - MicrobiologybioRxivPreprint
A new HIV-1 latency reversing agent activating HIV-Tat
Phuoc Bao Viet Tong, Laetitia Marty, Nawel Chekrit…·Bruno D. Beaumelle
This paper introduces a new HIV-1 latency reversing agent, D10, which activates HIV-1 Tat to induce viral production from latent cells.
DOI 10.64898/2026.08.20.745916 - BiochemistrybioRxivPreprint
Extensive global HIV-1 sequence diversity perturbs conserved features of the envelope glycan shield
Maddy L. Newby, Joel D. Allen, Emily Lucas…·Max Crispin
The paper maps glycan composition across HIV-1 pseudoviruses to show how sequence diversity affects the glycan shield and its vulnerability to broadly neutralizing antibodies.
DOI 10.64898/2026.08.20.745985 - ImmunologybioRxivPreprint
Asymmetric Boost Responses to an HIV-1 Vaccine: Boost-site Controls Secondary B-cell Fates
John S. Barber, Keisuke Tonouchi, Chen‐Hao Yeh…·Garnett H. Kelsoe
The paper shows that boosting at the same site as the initial immunization preferentially engages bnAb lineage precursors in secondary germinal centers, while contralateral boosting recruits naive and non-specific memory B cells.
- GenomicsbioRxivPreprint
APOBEC3G Splicing Defects in Nonhuman Primate Models Result in Disparate Viral Mutational Profiles Relative to Humans
Armando D. Mendez, Rachael Springman-Rodriguez, Ayub Bokani…·Diako Ebrahimi
This study identifies APOBEC3G splicing defects in nonhuman primates that lead to different viral mutation profiles compared to humans.
DOI 10.64898/2026.08.06.743345 - Cell BiologybioRxivPreprint
RelB proximity proteomics and CRISPR screening define chromatin regulators of noncanonical NF-κB control of HIV latency and reactivation
Cameron R. Bussey-Sutton, Carley N Gray, Benjamin J. Wu…·Brian D. Strahl
This study identifies chromatin regulators of HIV latency and reactivation using RelB proximity proteomics and CRISPR screening, revealing key acetyltransferases involved in noncanonical NF-κB pathway activation.
DOI 10.64898/2026.08.11.744217